RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 FSTL1Q12841 308 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 PPP2R5CQ13362 524 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 CUL4BQ13620 913 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 HYIQ5T013 277 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 POTEBQ6S5H4 581 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 KCNK18Q7Z418 384 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 FAM133AQ8N9E0 248 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 SHCBP1Q8NEM2 672 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 CUEDC2Q9H467 287 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 BLOC1S4Q9NUP1 217 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 KBTBD4Q9NVX7 518 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 ANO10Q9NW15 660 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 KDM3AQ9Y4C1 1321 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 FAM155AB1AL88 458 aaPredicted RBP12.25□□□□□ -0.45
COL21A1-211ENST00000488912 MED24O75448 989 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 RGS20O76081 388 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 PGK2P07205 417 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 TERF1P54274 439 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 NLRP12P59046 1061 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 ITGB3BPQ13352 177 aaPredicted RBP12.25□□□□□ -0.45
COL21A1-211ENST00000488912 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 ERMNQ8TAM6 284 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 INPP4AQ96PE3 977 aaPredicted RBP12.25□□□□□ -0.45
COL21A1-211ENST00000488912 MAP7D2Q96T17 732 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 MMP19Q99542 508 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 RIT2Q99578 217 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 TEKT3Q9BXF9 490 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 MAGEF1Q9HAY2 307 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 STK17AQ9UEE5 414 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 MAN1B1Q9UKM7 699 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 WDR81Q562E7 1941 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 SOWAHBA6NEL2 793 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 DDX39AO00148 427 aaKnown RBP12.25□□□□□ -0.45
COL21A1-211ENST00000488912 DHX15O43143 795 aaKnown RBP12.25□□□□□ -0.45
COL21A1-211ENST00000488912 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
COL21A1-211ENST00000488912 TOMM70O94826 608 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 BMP6P22004 513 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 KCTD2Q14681 263 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 B3GNT9Q6UX72 402 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 CATSPER3Q86XQ3 398 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 IWS1Q96ST2 819 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 UNC45AQ9H3U1 944 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 MORF4L1Q9UBU8 362 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 KIAA1024Q9UPX6 916 aa12.25□□□□□ -0.45
COL21A1-211ENST00000488912 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 TMEM88BA6NKF7 163 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 ATP9AO75110 1047 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 SMC2O95347 1197 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 SPATA31C1P0DKV0 1188 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 FCER1AP12319 257 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 RPA1P27694 616 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 ZNF165P49910 485 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 CCNA1P78396 465 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 CYP4A11Q02928 519 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 SEMA3FQ13275 785 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 LARP4BQ92615 738 aaKnown RBP12.24□□□□□ -0.45
COL21A1-211ENST00000488912 RAD54LQ92698 747 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 GPRASP2Q96D09 838 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 FGD4Q96M96 766 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 NT5C3AQ9H0P0 336 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 CBX8Q9HC52 389 aa12.24□□□□□ -0.45
COL21A1-211ENST00000488912 ADD3Q9UEY8 706 aaKnown RBP12.24□□□□□ -0.45
COL21A1-211ENST00000488912 DNAJC25-GNG10A0A024R161 153 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 DHX8Q14562 1220 aaKnown RBP12.23□□□□□ -0.45
COL21A1-211ENST00000488912 MCM6Q14566 821 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 NLRX1Q86UT6 975 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 LUZP1Q86V48 1076 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 EIF2AK1Q9BQI3 630 aaKnown RBP12.23□□□□□ -0.45
COL21A1-211ENST00000488912 RGL1Q9NZL6 768 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 E9PMD0 336 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 SLC26A4O43511 780 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 STAM2O75886 525 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 CAVIN2O95810 425 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 EDNRBP24530 442 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 MORC3Q14149 939 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 STXBP2Q15833 593 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 FAM110CQ1W6H9 321 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 GSDMAQ96QA5 445 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 ADGRA2Q96PE1 1338 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 DOCK3Q8IZD9 2030 aa12.23□□□□□ -0.45
COL21A1-211ENST00000488912 MYL1P05976 194 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 SV2BQ7L1I2 683 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 SMAP1Q8IYB5 467 aaPredicted RBP12.22□□□□□ -0.45
COL21A1-211ENST00000488912 TRIML1Q8N9V2 468 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 CCDC102AQ96A19 550 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
COL21A1-211ENST00000488912 TRIM9Q9C026 710 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 TBC1D22BQ9NU19 505 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 LOXHD1Q8IVV2 1947 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 MAFGO15525 162 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 EIF3JO75822 258 aaKnown RBP12.22□□□□□ -0.45
COL21A1-211ENST00000488912 RPN1P04843 607 aaKnown RBP12.22□□□□□ -0.45
COL21A1-211ENST00000488912 GRM1Q13255 1194 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 CTTNQ14247 550 aaKnown RBP12.22□□□□□ -0.45
COL21A1-211ENST00000488912 TAF1CQ15572 869 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms