RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 BACE2Q9Y5Z0 518 aa4.31□□□□□ -1.72
GPNMB-212ENST00000487890 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.31□□□□□ -1.72
GPNMB-212ENST00000487890 NAIPQ13075 1403 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 PRR33A8MZF0 331 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 K7ESF4 209 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 FZD9O00144 591 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 PLIN1O60240 522 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 GAS7O60861 476 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 CBX7O95931 251 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 MT-CO1P00395 513 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 MYBL2P10244 700 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 GLB1P16278 677 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 NAT1P18440 290 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 DNM2P50570 870 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 ERVK-21P61565 698 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 HLTFQ14527 1009 aaKnown RBP eCLIP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 PCBP2Q15366 365 aaKnown RBP eCLIP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 MEX3CQ5U5Q3 659 aaKnown RBP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 OVCH1Q7RTY7 1134 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 RCBTB1Q8NDN9 531 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 MPHOSPH6Q99547 160 aaKnown RBP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 DUSP23Q9BVJ7 150 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 SLC12A9Q9BXP2 914 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 CABP5Q9NP86 173 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 LUC7LQ9NQ29 371 aaKnown RBP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 OBP2AQ9NY56 170 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 H2AFY2Q9P0M6 372 aaPredicted RBP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 KCNH3Q9ULD8 1083 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 LUC7L2Q9Y383 392 aaKnown RBP4.3□□□□□ -1.72
GPNMB-212ENST00000487890 PPLO60437 1756 aa4.3□□□□□ -1.72
GPNMB-212ENST00000487890 SETD1AO15047 1707 aaKnown RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 NRXN3Q9Y4C0 1643 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 PTPDC1A2A3K4 754 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 GOLGA6CA6NDK9 693 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 GOLGA6BA6NDN3 693 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 APPP05067 770 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 GOLGA6DP0CG33 693 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 BMP3P12645 472 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 VAV1P15498 845 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 YBX3P16989 372 aaKnown RBP eCLIP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CCND1P24385 295 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 RXRBP28702 533 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 PDE6BP35913 854 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 TNK2Q07912 1038 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 KLF1Q13351 362 aaPredicted RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 HDAC1Q13547 482 aaPredicted RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 ODF1Q14990 250 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 INF2Q27J81 1249 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 GFOD2Q3B7J2 385 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 SFRP5Q5T4F7 317 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 E4F1Q66K89 784 aaPredicted RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CREB3L3Q68CJ9 461 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CWF19L1Q69YN2 538 aaKnown RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CXorf57Q6NSI4 855 aaKnown RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 Q6ZS46 218 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 HDGFL2Q7Z4V5 671 aaPredicted RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 DGKHQ86XP1 1220 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CHST14Q8NCH0 376 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CLRN3Q8NCR9 226 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 DIO2Q92813 273 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 TCTN2Q96GX1 697 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 AHCYL2Q96HN2 611 aaKnown RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 HDAC8Q9BY41 377 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CEP41Q9BYV8 373 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 CELF4Q9BZC1 486 aaKnown RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 ASCC2Q9H1I8 757 aaPredicted RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 IPPKQ9H8X2 491 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 GOLGA6AQ9NYA3 693 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 PPARGC1AQ9UBK2 798 aaKnown RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 XRN1Q8IZH2 1706 aaKnown RBP4.29□□□□□ -1.72
GPNMB-212ENST00000487890 HFM1A2PYH4 1435 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 FAM135BQ49AJ0 1406 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 ADAMTS13Q76LX8 1427 aa4.29□□□□□ -1.72
GPNMB-212ENST00000487890 SETBP1Q9Y6X0 1596 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 NEXMIFQ5QGS0 1516 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 CCDC66A2RUB6 948 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 VSTM5A8MXK1 200 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 TGM5O43548 720 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 LDHAP00338 332 aaKnown RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 SOD2P04179 222 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 PF4V1P10720 104 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 MAP4P27816 1152 aaKnown RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 NOS3P29474 1203 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 GMPRP36959 345 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 KIR3DL1P43629 444 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 NOP2P46087 812 aaKnown RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 IREB2P48200 963 aaKnown RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 SEPHS1P49903 392 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 KPNA1P52294 538 aaPredicted RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 NFKBIBQ15653 356 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 RGL3Q3MIN7 710 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 RTP2Q5QGT7 225 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 MBLAC2Q68D91 279 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 RCSD1Q6JBY9 416 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 PGM2L1Q6PCE3 622 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 TMED8Q6PL24 325 aaPredicted RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms