RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 LTFP02788 710 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 CYP1A1P04798 512 aaPredicted RBP6.96□□□□□ -1.3
SMC4-219ENST00000487747 COL6A2P12110 1019 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 ZNF20P17024 532 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 BORAQ6PGQ7 559 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 FAM124AQ86V42 546 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 BORCS6Q96GS4 357 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 CLIC6Q96NY7 704 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 TMPRSS5Q9H3S3 457 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 L2HGDHQ9H9P8 463 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 SLC6A20Q9NP91 592 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 ARHGEF4Q9NR80 690 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 PPP4R1LQ9P1A2 415 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 ST6GALNAC2Q9UJ37 374 aa6.96□□□□□ -1.3
SMC4-219ENST00000487747 C9orf118A6NHY6 69 aa6.95□□□□□ -1.3
SMC4-219ENST00000487747 COL6A1P12109 1028 aa6.95□□□□□ -1.3
SMC4-219ENST00000487747 YOD1Q5VVQ6 348 aaPredicted RBP6.95□□□□□ -1.3
SMC4-219ENST00000487747 OSBP2Q969R2 916 aa6.95□□□□□ -1.3
SMC4-219ENST00000487747 SAMD11Q96NU1 681 aa6.95□□□□□ -1.3
SMC4-219ENST00000487747 PTPN18Q99952 460 aa6.95□□□□□ -1.3
SMC4-219ENST00000487747 TELO2Q9Y4R8 837 aa6.95□□□□□ -1.3
SMC4-219ENST00000487747 PRODHO43272 600 aa6.94□□□□□ -1.3
SMC4-219ENST00000487747 CPZQ66K79 652 aa6.94□□□□□ -1.3
SMC4-219ENST00000487747 PHOSPHO1Q8TCT1 267 aa6.94□□□□□ -1.3
SMC4-219ENST00000487747 IGDCC4Q8TDY8 1250 aa6.94□□□□□ -1.3
SMC4-219ENST00000487747 GMLQ99445 158 aa6.94□□□□□ -1.3
SMC4-219ENST00000487747 KCNJ15Q99712 375 aa6.94□□□□□ -1.3
SMC4-219ENST00000487747 TMEM168Q9H0V1 697 aa6.94□□□□□ -1.3
SMC4-219ENST00000487747 R3HCC1Q9Y3T6 440 aaKnown RBP6.94□□□□□ -1.3
SMC4-219ENST00000487747 NKRFO15226 690 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMC4-219ENST00000487747 MATN3O15232 486 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 LAMTOR5O43504 91 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 TNFRSF1AP19438 455 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 HSP90AA2PQ14568 343 aaPredicted RBP6.93□□□□□ -1.3
SMC4-219ENST00000487747 GLB1LQ6UWU2 654 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 OTOP3Q7RTS5 596 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 TMEM209Q96SK2 561 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 C1QTNF3Q9BXJ4 246 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 HSPBP1Q9NZL4 362 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
SMC4-219ENST00000487747 KRIT1O00522 736 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 GPR42O15529 346 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 PABPC1P11940 636 aaKnown RBP6.92□□□□□ -1.3
SMC4-219ENST00000487747 TUSC3Q13454 348 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 ICAM4Q14773 271 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 PKN3Q6P5Z2 889 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 TRMT10BQ6PF06 316 aaKnown RBP6.92□□□□□ -1.3
SMC4-219ENST00000487747 LBX2Q6XYB7 198 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 KBTBD2Q8IY47 623 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 TTC9BQ8N6N2 239 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 NUDT10Q8NFP7 164 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 SGSM3Q96HU1 749 aa6.92□□□□□ -1.3
SMC4-219ENST00000487747 AARSD1Q9BTE6 412 aaKnown RBP6.92□□□□□ -1.3
SMC4-219ENST00000487747 B4GALT4O60513 344 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 FGFR1P11362 822 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 GRK2P25098 689 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 GRK3P35626 688 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 CYP4F22Q6NT55 531 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 RSPO2Q6UXX9 243 aaPredicted RBP6.91□□□□□ -1.3
SMC4-219ENST00000487747 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 SLC43A3Q8NBI5 491 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 TTLL11Q8NHH1 800 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 ZDHHC9Q9Y397 364 aa6.91□□□□□ -1.3
SMC4-219ENST00000487747 MAFKO60675 156 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 KLHL18O94889 574 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 CKMP06732 381 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 NFATC3Q12968 1075 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 CDSNQ15517 529 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
SMC4-219ENST00000487747 HABP4Q5JVS0 413 aaKnown RBP6.9□□□□□ -1.3
SMC4-219ENST00000487747 NSMFQ6X4W1 530 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 CHST13Q8NET6 341 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 UHMK1Q8TAS1 419 aaKnown RBP6.9□□□□□ -1.3
SMC4-219ENST00000487747 FTSJ1Q9UET6 329 aa6.9□□□□□ -1.3
SMC4-219ENST00000487747 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 FAHP16930 419 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 GLRBP48167 497 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 PPP2CBP62714 309 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 PPP2CAP67775 309 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 VASNQ6EMK4 673 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 TRIM48Q8IWZ4 208 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 CD248Q9HCU0 757 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 TRAF6Q9Y4K3 522 aa6.89□□□□□ -1.31
SMC4-219ENST00000487747 NPEPPSL1A6NEC2 478 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 ACOT7O00154 380 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 GNAT1P11488 350 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 EPHB4P54760 987 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 ZXDAP98168 799 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 RAB33AQ14088 237 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 SKIDA1Q1XH10 827 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 STYK1Q6J9G0 422 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 SPATC1Q76KD6 591 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 SPRED1Q7Z699 444 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 KLHL36Q8N4N3 616 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 SH3RF2Q8TEC5 729 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 DVL3Q92997 716 aaPredicted RBP6.88□□□□□ -1.31
SMC4-219ENST00000487747 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 IPPKQ9H8X2 491 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms