RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 F2P00734 622 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 NCLP19338 710 aaKnown RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 CLCN5P51795 746 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 STAT2P52630 851 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 MTMR3Q13615 1198 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 DUSP6Q16828 381 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 ALDH1L2Q3SY69 923 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 PAN2Q504Q3 1202 aaKnown RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 ANKRD54Q6NXT1 300 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 MAML2Q8IZL2 1156 aaPredicted RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 GMCL1P1Q8NEA9 526 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 STAG1Q8WVM7 1258 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 GPKOWQ92917 476 aaPredicted RBP eCLIP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 ZFP91Q96JP5 570 aaPredicted RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 DNAJC2Q99543 621 aaKnown RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 TLE6Q9H808 572 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 EPB41L4AQ9HCS5 686 aaPredicted RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 ERVK-5Q9HDB9 667 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 IL1RAPL2Q9NP60 686 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 SH2B1Q9NRF2 756 aaPredicted RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 ATP8A2Q9NTI2 1148 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 LIMD1Q9UGP4 676 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 ISY1Q9ULR0 285 aaKnown RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 MTMR7Q9Y216 660 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 SLC4A4Q9Y6R1 1079 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 ANKRD11Q6UB99 2663 aaPredicted RBP6.98□□□□□ -1.29
COL4A3-206ENST00000487633 KAT6AQ92794 2004 aa6.98□□□□□ -1.29
COL4A3-206ENST00000487633 KRBA1A5PL33 1030 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 GSG1L2A8MUP6 293 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 HIDE1A8MVS5 230 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 ENPP3O14638 875 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 NKRFO15226 690 aaKnown RBP eCLIP6.97□□□□□ -1.29
COL4A3-206ENST00000487633 KPNA6O60684 536 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 IGSF3O75054 1194 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 DGKIO75912 1065 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 PARNO95453 639 aaKnown RBP6.97□□□□□ -1.29
COL4A3-206ENST00000487633 CHRNA1P02708 482 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 GNAI2P04899 355 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 GNAI3P08754 354 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 GLULP15104 373 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 HOXC8P31273 242 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 TECP42680 631 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 RPS6P62753 249 aaKnown RBP6.97□□□□□ -1.29
COL4A3-206ENST00000487633 PDE4DQ08499 809 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 SLFN5Q08AF3 891 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 OS9Q13438 667 aaPredicted RBP6.97□□□□□ -1.29
COL4A3-206ENST00000487633 BTG3Q14201 252 aaPredicted RBP6.97□□□□□ -1.29
COL4A3-206ENST00000487633 TKFCQ3LXA3 575 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 AACSQ86V21 672 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 C12orf76Q8N812 135 aaPredicted RBP6.97□□□□□ -1.29
COL4A3-206ENST00000487633 SCFD2Q8WU76 684 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 SEPT8Q92599 483 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 ZBTB10Q96DT7 871 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 CHAMP1Q96JM3 812 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 TAAR1Q96RJ0 339 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 C16orf70Q9BSU1 422 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 MFSD1Q9H3U5 465 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 PARD6AQ9NPB6 346 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 AAASQ9NRG9 546 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 EXOC6BQ9Y2D4 811 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
COL4A3-206ENST00000487633 DOCK6Q96HP0 2047 aa6.96□□□□□ -1.29
COL4A3-206ENST00000487633 LAMA5O15230 3695 aa6.96□□□□□ -1.29
COL4A3-206ENST00000487633 DOCK8Q8NF50 2099 aa6.96□□□□□ -1.29
COL4A3-206ENST00000487633 MYH6P13533 1939 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 MINDY4BA8MYZ0 360 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 GH1P01241 217 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 ICAM1P05362 532 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 SP9P0CG40 484 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 GHRP10912 638 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 CASTP20810 708 aaKnown RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 ATP8B2P98198 1209 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 SP2Q02086 613 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 IKQ13123 557 aaPredicted RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 HSDL1Q3SXM5 330 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 SPECC1Q5M775 1068 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 SYDE2Q5VT97 1194 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 RPAP2Q8IXW5 612 aaPredicted RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 UBALD2Q8IYN6 164 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 ST13P5Q8NFI4 369 aaPredicted RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 RUBCNQ92622 972 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 P2RX5Q93086 422 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 CLUAP1Q96AJ1 413 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 HAUS7Q99871 368 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 BCL11AQ9H165 835 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 RANBP17Q9H2T7 1088 aaKnown RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 CPVLQ9H3G5 476 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 RNPEPQ9H4A4 650 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 AGO3Q9H9G7 860 aaKnown RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 MRS2Q9HD23 443 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 IL17RBQ9NRM6 502 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 DLGAP2Q9P1A6 1054 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 DDX41Q9UJV9 622 aaKnown RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 NOP58Q9Y2X3 529 aaKnown RBP6.96□□□□□ -1.3
COL4A3-206ENST00000487633 EMSYQ7Z589 1322 aa6.96□□□□□ -1.3
COL4A3-206ENST00000487633 MIA3Q5JRA6 1907 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 RALGAPA1Q6GYQ0 2036 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 FSCN2O14926 492 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 TTLL1O95922 423 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 DCNP07585 359 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms