RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ARHGAP45Q92619 1136 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
TRIM56-204ENST00000487252 NEK1Q96PY6 1258 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 ALG1Q9BT22 464 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 MFSD1Q9H3U5 465 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 ZFYVE26Q68DK2 2539 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 KIAA1217Q5T5P2 1943 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 DGKIO75912 1065 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 BTG3Q14201 252 aaPredicted RBP13.86□□□□□ -0.19
TRIM56-204ENST00000487252 DUSP6Q16828 381 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 POF1BQ8WVV4 589 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 CLEC4DQ8WXI8 215 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 CDCA3Q99618 268 aaPredicted RBP13.86□□□□□ -0.19
TRIM56-204ENST00000487252 RTP3Q9BQQ7 232 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 TLE6Q9H808 572 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 R4GN57 208 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 SPEGQ15772 3267 aa13.86□□□□□ -0.19
TRIM56-204ENST00000487252 C2CD4DB7Z1M9 353 aa13.85□□□□□ -0.19
TRIM56-204ENST00000487252 SLC1A4P43007 532 aa13.85□□□□□ -0.19
TRIM56-204ENST00000487252 LY6KQ17RY6 165 aa13.85□□□□□ -0.19
TRIM56-204ENST00000487252 KLHL23Q8NBE8 558 aa13.85□□□□□ -0.19
TRIM56-204ENST00000487252 SUMF1Q8NBK3 374 aa13.85□□□□□ -0.19
TRIM56-204ENST00000487252 RASGRP4Q8TDF6 673 aa13.85□□□□□ -0.19
TRIM56-204ENST00000487252 MPHOSPH6Q99547 160 aaKnown RBP13.85□□□□□ -0.19
TRIM56-204ENST00000487252 RANBP17Q9H2T7 1088 aaKnown RBP13.85□□□□□ -0.19
TRIM56-204ENST00000487252 MRPL42Q9Y6G3 142 aaKnown RBP13.85□□□□□ -0.19
TRIM56-204ENST00000487252 SLC4A4Q9Y6R1 1079 aa13.85□□□□□ -0.19
TRIM56-204ENST00000487252 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 GOLIM4O00461 696 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 PER2O15055 1255 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 ZNF286BP0CG31 522 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 SP100P23497 879 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-204ENST00000487252 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 ANKRD54Q6NXT1 300 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 FAM9BQ8IZU0 186 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 FLCNQ8NFG4 579 aa13.84□□□□□ -0.19
TRIM56-204ENST00000487252 MCCP23508 829 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 CALML3P27482 149 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 RPS6P62753 249 aaKnown RBP13.83□□□□□ -0.2
TRIM56-204ENST00000487252 IKQ13123 557 aaPredicted RBP13.83□□□□□ -0.2
TRIM56-204ENST00000487252 FAM26DQ5JW98 314 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 KCTD1Q719H9 257 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 DHX37Q8IY37 1157 aaKnown RBP13.83□□□□□ -0.2
TRIM56-204ENST00000487252 PPTC7Q8NI37 304 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 MYH7BA7E2Y1 1941 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 FRYQ5TBA9 3013 aa13.83□□□□□ -0.2
TRIM56-204ENST00000487252 CHGBP05060 677 aa13.82□□□□□ -0.2
TRIM56-204ENST00000487252 ASGR2P07307 311 aa13.82□□□□□ -0.2
TRIM56-204ENST00000487252 HOXB8P17481 243 aaPredicted RBP13.82□□□□□ -0.2
TRIM56-204ENST00000487252 UBE3CQ15386 1083 aa13.82□□□□□ -0.2
TRIM56-204ENST00000487252 CHST3Q7LGC8 479 aa13.82□□□□□ -0.2
TRIM56-204ENST00000487252 CMTR2Q8IYT2 770 aaKnown RBP13.82□□□□□ -0.2
TRIM56-204ENST00000487252 ZDHHC14Q8IZN3 488 aa13.82□□□□□ -0.2
TRIM56-204ENST00000487252 NEDD1Q8NHV4 660 aa13.82□□□□□ -0.2
TRIM56-204ENST00000487252 SH2B1Q9NRF2 756 aaPredicted RBP13.82□□□□□ -0.2
TRIM56-204ENST00000487252 DDX41Q9UJV9 622 aaKnown RBP13.82□□□□□ -0.2
TRIM56-204ENST00000487252 MYH7P12883 1935 aa13.82□□□□□ -0.2
TRIM56-204ENST00000487252 B4DLN1 442 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 ENPP3O14638 875 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 PPFIA4O75335 1185 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 BCAR3O75815 825 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 NEFLP07196 543 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
TRIM56-204ENST00000487252 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
TRIM56-204ENST00000487252 UBE3AQ05086 875 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 GIMAP6Q6P9H5 292 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 ZC3H14Q6PJT7 736 aaKnown RBP13.81□□□□□ -0.2
TRIM56-204ENST00000487252 BTNL9Q6UXG8 535 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 AACSQ86V21 672 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 RTKNQ9BST9 563 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 POMKQ9H5K3 350 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 EHMT1Q9H9B1 1298 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
TRIM56-204ENST00000487252 GSG1L2A8MUP6 293 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 PRR5-ARHGAP8B1AHC4 643 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 FSCN2O14926 492 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 TREHO43280 583 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 PRDM1O75626 825 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 CTSHP09668 335 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 TECP42680 631 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 ARHGAP8P85298 464 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 RASGRP2Q7LDG7 609 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 TRMT2AQ8IZ69 625 aaKnown RBP13.8□□□□□ -0.2
TRIM56-204ENST00000487252 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-204ENST00000487252 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
TRIM56-204ENST00000487252 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
TRIM56-204ENST00000487252 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms