RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PIK3C2BO00750 1634 aa6.1□□□□□ -1.43
SNRNP40-205ENST00000486941 DAPK1P53355 1430 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 NTRK1P04629 796 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 KCNA6P17658 529 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 CACNB2Q08289 660 aaPredicted RBP6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 IDI1Q13907 227 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 COL9A2Q14055 689 aaPredicted RBP6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 INF2Q27J81 1249 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 ZNF761Q86XN6 746 aaPredicted RBP6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 LINC00482Q8N8I6 264 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 NETO2Q8NC67 525 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 DDX11Q96FC9 970 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 GORASP1Q9BQQ3 440 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 CLEC1BQ9P126 229 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 FAN1Q9Y2M0 1017 aa6.09□□□□□ -1.43
SNRNP40-205ENST00000486941 LMTK2Q8IWU2 1503 aa6.09□□□□□ -1.44
SNRNP40-205ENST00000486941 FAM135BQ49AJ0 1406 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 ANKRD30AQ9BXX3 1397 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 FUCA1P04066 466 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 SEPHS1P49903 392 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 HDLBPQ00341 1268 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 AMPD2Q01433 879 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 SMAD4Q13485 552 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 SPATS1Q496A3 300 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 WWC2Q6AWC2 1192 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 KIAA1211LQ6NV74 962 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 GPRASP2Q96D09 838 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 CRBNQ96SW2 442 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 SLC52A1Q9NWF4 448 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 EFCAB6Q5THR3 1501 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 FGD6Q6ZV73 1430 aa6.08□□□□□ -1.44
SNRNP40-205ENST00000486941 TET3O43151 1660 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 NPHP3-ACAD11A0A0J9YXS1 232 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 SCAMP3O14828 347 aaKnown RBP6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 SGSM2O43147 1006 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 PPM1BO75688 479 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 PLS3P13797 630 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 INSRRP14616 1297 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 PAMP19021 973 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 CNR2P34972 360 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 GJA8P48165 433 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 NASPP49321 788 aaPredicted RBP6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 CASP7P55210 303 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 GRB10Q13322 594 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 UBXN11Q5T124 520 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 PEX11GQ96HA9 241 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 GBP3Q9H0R5 595 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 RGS17Q9UGC6 210 aaPredicted RBP6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 EMC9Q9Y3B6 208 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 NOS1P29475 1434 aa6.07□□□□□ -1.44
SNRNP40-205ENST00000486941 TMEM94Q12767 1356 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 VAMP1P23763 118 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 SARSP49591 514 aaKnown RBP6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 TRIM26Q12899 539 aaPredicted RBP6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 ZXDCQ2QGD7 858 aaPredicted RBP6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 STK32CQ86UX6 486 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 RGS22Q8NE09 1264 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 ZBTB8AQ96BR9 441 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 USP40Q9NVE5 1235 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 AKT3Q9Y243 479 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 SLC12A7Q9Y666 1083 aa6.06□□□□□ -1.44
SNRNP40-205ENST00000486941 ADGRL2O95490 1459 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 RPRD2Q5VT52 1461 aaKnown RBP6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 CHD2O14647 1828 aaKnown RBP6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 MYO5BQ9ULV0 1848 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 TBX1O43435 398 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 KCNH1O95259 989 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 ITGB3P05106 788 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 THBDP07204 575 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 SCRN1Q12765 414 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 SLC9A5Q14940 896 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 PPP2R5EQ16537 467 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 TMCO4Q5TGY1 634 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 NT5DC4Q86YG4 428 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 FRS2Q8WU20 508 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 MRGPRX3Q96LB0 322 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 MMP19Q99542 508 aa6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 TMEFF2Q9UIK5 374 aaPredicted RBP6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.05□□□□□ -1.44
SNRNP40-205ENST00000486941 ADGRB3O60242 1522 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 ROBO1Q9Y6N7 1651 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 NKTRP30414 1462 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 K7ESM1 405 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 MFAP1P55081 439 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 PRR31Q5SQ13 230 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 VHLLQ6RSH7 139 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 CCDC103Q8IW40 242 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 TEX2Q8IWB9 1127 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 OR6P1Q8NGX9 317 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 NPLOC4Q8TAT6 608 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 ADAMTS17Q8TE56 1095 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 C11orf84Q9BUA3 381 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 SSBP3Q9BWW4 388 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 FBXL7Q9UJT9 491 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 SUGT1Q9Y2Z0 365 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 ANKRD50Q9ULJ7 1429 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 NWD1Q149M9 1564 aa6.04□□□□□ -1.44
SNRNP40-205ENST00000486941 MSH6P52701 1360 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms