RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 HOXD12P35452 270 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
MECP2-209ENST00000486506 GNGT1P63211 74 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 MXRA7P84157 204 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 DACT2Q5SW24 774 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 RNF187Q5TA31 235 aaPredicted RBP8.61□□□□□ -1.03
MECP2-209ENST00000486506 STRIP1Q5VSL9 837 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 SESTD1Q86VW0 696 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 MYO1HQ8N1T3 1032 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 SLC43A3Q8NBI5 491 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 ZNF570Q96NI8 536 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 SH3GL2Q99962 352 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 BPIFA3Q9BQP9 254 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 NOD2Q9HC29 1040 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 DMAP1Q9NPF5 467 aaPredicted RBP8.61□□□□□ -1.03
MECP2-209ENST00000486506 JADE2Q9NQC1 790 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 KIAA1551Q9HCM1 1747 aa8.61□□□□□ -1.03
MECP2-209ENST00000486506 LRRIQ3A6PVS8 624 aaPredicted RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 LSM1O15116 133 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 KDM1AO60341 852 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 PRELPP51888 382 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 EVX2Q03828 476 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 SGSM1Q2NKQ1 1148 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 MAATS1Q7Z4T9 603 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 IFNL3Q8IZI9 196 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 AOPEPQ8N6M6 819 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
MECP2-209ENST00000486506 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 STAMBPL1Q96FJ0 436 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 MAML3Q96JK9 1138 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 SEZ6LQ9BYH1 1024 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 XPO4Q9C0E2 1151 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 NAPBQ9H115 298 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 MKS1Q9NXB0 559 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 PCDHAC2Q9Y5I4 1007 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 DLEC1Q9Y238 1755 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 COL4A5P29400 1685 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 CCT8P50990 548 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 SKOR1P84550 965 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 EIF2B5Q13144 721 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 SH2D4BQ5SQS7 431 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 ARHGAP27Q6ZUM4 889 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 STOX1Q6ZVD7 989 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 NIM1KQ8IY84 436 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 NKX2-3Q8TAU0 364 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 JDP2Q8WYK2 163 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 ZNF653Q96CK0 615 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 HVCN1Q96D96 273 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 NAP1L3Q99457 506 aaPredicted RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 SLC39A3Q9BRY0 314 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 OSBPL1AQ9BXW6 950 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 SH3GLB1Q9Y371 365 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 TMEM247A6NEH6 219 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 PSMD14O00487 310 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 MTRF1O75570 445 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 KIF5BP33176 963 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 TCF7P36402 384 aaPredicted RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 BTDP43251 543 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 NLRP5P59047 1200 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 GNG11P61952 73 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 MRPS35P82673 323 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 FAM173BQ6P4H8 233 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 TTC30BQ8N4P2 665 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 SH3RF3Q8TEJ3 882 aaPredicted RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 CLIP3Q96DZ5 547 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 ZMAT2Q96NC0 199 aaKnown RBP8.6□□□□□ -1.03
MECP2-209ENST00000486506 DAAM1Q9Y4D1 1078 aa8.6□□□□□ -1.03
MECP2-209ENST00000486506 MYH13Q9UKX3 1938 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 MROH7-TTC4A0A0A0MT08 1334 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 SCN9AQ15858 1988 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 MYH7P12883 1935 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 CYP2D7A0A087X1C5 515 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 SRRM3A6NNA2 597 aaPredicted RBP8.59□□□□□ -1.03
MECP2-209ENST00000486506 ZNF213O14771 459 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 ZNF202O95125 648 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 GSTO1P78417 241 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 GUCY1B3Q02153 619 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 IMMTQ16891 758 aaKnown RBP8.59□□□□□ -1.03
MECP2-209ENST00000486506 WDR93Q6P2C0 686 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 CCDC121Q6ZUS5 278 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 LRRC43Q8N309 656 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 GIMAP1Q8WWP7 306 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 P3H4Q92791 437 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 TRAPPC9Q96Q05 1148 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 WDR24Q96S15 920 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 PNKPQ96T60 521 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 IFNKQ9P0W0 207 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 DAGLAQ9Y4D2 1042 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 TTLL3Q9Y4R7 772 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 DOCK2Q92608 1830 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 MINDY4BA8MYZ0 360 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 WDHD1O75717 1129 aaPredicted RBP8.59□□□□□ -1.03
MECP2-209ENST00000486506 BAG3O95817 575 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms