RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 ABLIM1O14639 778 aa8.44□□□□□ -1.06
RTN4-214ENST00000486085 ZBTB7AO95365 584 aa8.44□□□□□ -1.06
RTN4-214ENST00000486085 YBX1P67809 324 aaKnown RBP8.44□□□□□ -1.06
RTN4-214ENST00000486085 SEPT7Q16181 437 aaKnown RBP8.44□□□□□ -1.06
RTN4-214ENST00000486085 PTPROQ16827 1216 aa8.44□□□□□ -1.06
RTN4-214ENST00000486085 SKOR2Q2VWA4 1001 aaPredicted RBP8.44□□□□□ -1.06
RTN4-214ENST00000486085 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
RTN4-214ENST00000486085 NXPE1Q8N323 547 aa8.44□□□□□ -1.06
RTN4-214ENST00000486085 CD244Q9BZW8 370 aa8.44□□□□□ -1.06
RTN4-214ENST00000486085 NSUN3Q9H649 340 aaKnown RBP8.44□□□□□ -1.06
RTN4-214ENST00000486085 SMURF1Q9HCE7 757 aa8.44□□□□□ -1.06
RTN4-214ENST00000486085 MYOTQ9UBF9 498 aa8.44□□□□□ -1.06
RTN4-214ENST00000486085 LTFP02788 710 aa8.43□□□□□ -1.06
RTN4-214ENST00000486085 TMC6Q7Z403 805 aa8.43□□□□□ -1.06
RTN4-214ENST00000486085 ANKLE2Q86XL3 938 aa8.43□□□□□ -1.06
RTN4-214ENST00000486085 CHST14Q8NCH0 376 aa8.43□□□□□ -1.06
RTN4-214ENST00000486085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.43□□□□□ -1.06
RTN4-214ENST00000486085 ASH2LQ9UBL3 628 aa8.43□□□□□ -1.06
RTN4-214ENST00000486085 ZNF652Q9Y2D9 606 aa8.43□□□□□ -1.06
RTN4-214ENST00000486085 COL4A3BPQ9Y5P4 624 aa8.43□□□□□ -1.06
RTN4-214ENST00000486085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
RTN4-214ENST00000486085 TCRBV5S2A0A599 114 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 PTPDC1A2A3K4 754 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 MAN2B1O00754 1011 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 KRT37O76014 449 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 VIPR1P32241 457 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 MECP2P51608 486 aaKnown RBP8.42□□□□□ -1.06
RTN4-214ENST00000486085 TUSC3Q13454 348 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 SLC9A5Q14940 896 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 MLANAQ16655 118 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 CYP4F22Q6NT55 531 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 STRA8Q7Z7C7 330 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 PHOSPHO1Q8TCT1 267 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 CLEC4DQ8WXI8 215 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 ALG3Q92685 438 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 TSPAN17Q96FV3 270 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 GPATCH3Q96I76 525 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.42□□□□□ -1.06
RTN4-214ENST00000486085 DCP1AQ9NPI6 582 aaPredicted RBP8.42□□□□□ -1.06
RTN4-214ENST00000486085 FAM53CQ9NYF3 392 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 B4GALT6Q9UBX8 382 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 SRPK3Q9UPE1 567 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 ZKSCAN5Q9Y2L8 839 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 NUB1Q9Y5A7 615 aa8.42□□□□□ -1.06
RTN4-214ENST00000486085 SLC12A8A0AV02 714 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 LRRC10BA6NIK2 292 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 ZNF891A8MT65 544 aaPredicted RBP8.41□□□□□ -1.06
RTN4-214ENST00000486085 SCNN1BP51168 640 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 SRSF3P84103 164 aaKnown RBP8.41□□□□□ -1.06
RTN4-214ENST00000486085 NFKB2Q00653 900 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 GRIN1Q05586 938 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 STRN3Q13033 797 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 SART3Q15020 963 aaKnown RBP8.41□□□□□ -1.06
RTN4-214ENST00000486085 ARHGAP44Q17R89 818 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 OLFML2BQ68BL8 750 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 KCTD1Q719H9 257 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 NLGN4XQ8N0W4 816 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 ARRDC4Q8NCT1 418 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 ZCRB1Q8TBF4 217 aaKnown RBP8.41□□□□□ -1.06
RTN4-214ENST00000486085 ORAI3Q9BRQ5 295 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 FAM126AQ9BYI3 521 aaPredicted RBP8.41□□□□□ -1.06
RTN4-214ENST00000486085 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 TELO2Q9Y4R8 837 aa8.41□□□□□ -1.06
RTN4-214ENST00000486085 GAS7O60861 476 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 F2P00734 622 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 IBSPP21815 317 aaPredicted RBP8.4□□□□□ -1.06
RTN4-214ENST00000486085 ZNF200P98182 395 aaPredicted RBP8.4□□□□□ -1.06
RTN4-214ENST00000486085 TMEM132EQ6IEE7 984 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 HHIPL2Q6UWX4 724 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.4□□□□□ -1.06
RTN4-214ENST00000486085 KIF18BQ86Y91 864 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 TRIM48Q8IWZ4 208 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 OR2W6PQ8NHA6 318 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 EPB41L4BQ9H329 900 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 PCDH12Q9NPG4 1184 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 SIRT5Q9NXA8 310 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 ATP23Q9Y6H3 246 aa8.4□□□□□ -1.06
RTN4-214ENST00000486085 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
RTN4-214ENST00000486085 SCDO00767 359 aa8.39□□□□□ -1.07
RTN4-214ENST00000486085 AMPD3Q01432 767 aa8.39□□□□□ -1.07
RTN4-214ENST00000486085 BTBD8Q5XKL5 378 aa8.39□□□□□ -1.07
RTN4-214ENST00000486085 CPZQ66K79 652 aa8.39□□□□□ -1.07
RTN4-214ENST00000486085 FSTL4Q6MZW2 842 aa8.39□□□□□ -1.07
RTN4-214ENST00000486085 YIPF4Q9BSR8 244 aa8.39□□□□□ -1.07
RTN4-214ENST00000486085 MYOCOSA0A1B0GUC4 107 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 HRKO00198 91 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 ATP2A2P16615 1042 aaKnown RBP8.38□□□□□ -1.07
RTN4-214ENST00000486085 EPHA5P54756 1037 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 IRF9Q00978 393 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 DSG1Q02413 1049 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 DHCR24Q15392 516 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 FIGNQ5HY92 759 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 OTOP1Q7RTM1 612 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 AFAP1L2Q8N4X5 818 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 USP7Q93009 1102 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 GPR101Q96P66 508 aaPredicted RBP8.38□□□□□ -1.07
RTN4-214ENST00000486085 BOCQ9BWV1 1114 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
RTN4-214ENST00000486085 THG1LQ9NWX6 298 aaKnown RBP8.38□□□□□ -1.07
RTN4-214ENST00000486085 PEG3Q9GZU2 1588 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms