RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ACAD9Q9H845 621 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 MORF4L1Q9UBU8 362 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 ADAMTS5Q9UNA0 930 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 MRPL11Q9Y3B7 192 aaKnown RBP6.47□□□□□ -1.37
COPS3-208ENST00000486032 IVNS1ABPQ9Y6Y0 642 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 SMCHD1A6NHR9 2005 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 VPS37CA5D8V6 355 aaPredicted RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 STXBP3O00186 592 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 SPINT1O43278 529 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 FKTNO75072 461 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 PGK2P07205 417 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 FCER1AP12319 257 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 XBP1P17861 261 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 CYP2B6P20813 491 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 HOXA13P31271 388 aaPredicted RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 ADCY7P51828 1080 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 OAZ1P54368 228 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 FCGRTP55899 365 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 HMGN5P82970 282 aaKnown RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 TRAF1Q13077 416 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 CUL4AQ13619 759 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 GNL2Q13823 731 aaKnown RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 BAATQ14032 418 aaPredicted RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 KCTD2Q14681 263 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 TKFCQ3LXA3 575 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 JAKMIP3Q5VZ66 844 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 SLC30A10Q6XR72 485 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 RNF207Q6ZRF8 634 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 OTOP1Q7RTM1 612 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 GPR142Q7Z601 462 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 DPP9Q86TI2 863 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 FCHSD1Q86WN1 690 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 RIOX2Q8IUF8 465 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 SMARCC2Q8TAQ2 1214 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 FOXD4L4Q8WXT5 416 aaPredicted RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 FOXJ1Q92949 421 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 CUL5Q93034 780 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 ERO1AQ96HE7 468 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 ABHD8Q96I13 439 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 PGBD1Q96JS3 809 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 C8orf76Q96K31 380 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 LLPHQ9BRT6 129 aaKnown RBP6.46□□□□□ -1.38
COPS3-208ENST00000486032 TMEM260Q9NX78 707 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 GABRQQ9UN88 632 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 STK36Q9NRP7 1315 aa6.46□□□□□ -1.38
COPS3-208ENST00000486032 H3BQV1 296 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 GCOM1H8Y6P7 765 aaPredicted RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 RBAK-RBAKDNI3L0D1 243 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 ATP2A1O14983 1001 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 ADAMTS3O15072 1205 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 MYCP01106 439 aaPredicted RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 POLR2MP0CAP2 368 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 ADORA2AP29274 412 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 MAPK4P31152 587 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 COPB2P35606 906 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 UBXN2AP68543 259 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 LACTBP83111 547 aaPredicted RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 LARP1BQ659C4 914 aaKnown RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 KRT40Q6A162 431 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 MCTP1Q6DN14 999 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 USP17L6PQ6QN14 398 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 MCF2L2Q86YR7 1114 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 SHCBP1Q8NEM2 672 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 CHST13Q8NET6 341 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 CCDC148Q8NFR7 591 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 RASGRP4Q8TDF6 673 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 CCDC12Q8WUD4 166 aaPredicted RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 CLEC4DQ8WXI8 215 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 SHISA4Q96DD7 197 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 MROH8Q9H579 483 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 PSTPIP2Q9H939 334 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 C6orf50Q9HD87 102 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 A1CFQ9NQ94 594 aaKnown RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 BARHL2Q9NY43 387 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 BIN2Q9UBW5 565 aaPredicted RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 FBXO40Q9UH90 709 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 PNMA2Q9UL42 364 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 KIF3AQ9Y496 699 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 TRIM17Q9Y577 477 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 PTCH2Q9Y6C5 1203 aa6.45□□□□□ -1.38
COPS3-208ENST00000486032 DDX49Q9Y6V7 483 aaKnown RBP6.45□□□□□ -1.38
COPS3-208ENST00000486032 DOCK3Q8IZD9 2030 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 hCG_1984214I3L0E3 225 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 EIF2AK2P19525 551 aaKnown RBP6.44□□□□□ -1.38
COPS3-208ENST00000486032 ATP2B1P20020 1258 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 HOXD10P28358 340 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 GNA11P29992 359 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 MRPL12P52815 198 aaKnown RBP6.44□□□□□ -1.38
COPS3-208ENST00000486032 SOX10P56693 466 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 RPS6P62753 249 aaKnown RBP6.44□□□□□ -1.38
COPS3-208ENST00000486032 CNTN2Q02246 1040 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 PRKCZQ05513 592 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 SAFBQ15424 915 aaKnown RBP eCLIP6.44□□□□□ -1.38
COPS3-208ENST00000486032 ARHGEF16Q5VV41 709 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 CTU1Q7Z7A3 348 aaKnown RBP6.44□□□□□ -1.38
COPS3-208ENST00000486032 BLIDQ8IZY5 108 aa6.44□□□□□ -1.38
COPS3-208ENST00000486032 ZNF713Q8N859 430 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms