RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 H0YGN5 161 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 WNT7AO00755 349 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 HOXD8P13378 290 aaPredicted RBP6.62□□□□□ -1.35
CUX1-208ENST00000485792 KIF5BP33176 963 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 GNAQP50148 359 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 CDK7P50613 346 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 MRPS9P82933 396 aaKnown RBP6.62□□□□□ -1.35
CUX1-208ENST00000485792 BEX3Q00994 111 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 SP2Q02086 613 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 TRAF1Q13077 416 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 IKQ13123 557 aaPredicted RBP6.62□□□□□ -1.35
CUX1-208ENST00000485792 UBE2SQ16763 222 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 DUSP28Q4G0W2 176 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 BRICD5Q6PL45 260 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 NSMFQ6X4W1 530 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 RNF19BQ6ZMZ0 732 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 RUFY3Q7L099 469 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 RETREG3Q86VR2 466 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 HOMER1Q86YM7 354 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 MCF2L2Q86YR7 1114 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 SLC43A3Q8NBI5 491 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 ARRDC4Q8NCT1 418 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 CRYGNQ8WXF5 182 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 BRF1Q92994 677 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 PGBD1Q96JS3 809 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 JAKMIP1Q96N16 626 aaKnown RBP6.62□□□□□ -1.35
CUX1-208ENST00000485792 VTA1Q9NP79 307 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 ADD3Q9UEY8 706 aaKnown RBP6.62□□□□□ -1.35
CUX1-208ENST00000485792 FAM184BQ9ULE4 1060 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 MRPL11Q9Y3B7 192 aaKnown RBP6.62□□□□□ -1.35
CUX1-208ENST00000485792 PCDHA1Q9Y5I3 950 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 MYH15Q9Y2K3 1946 aa6.62□□□□□ -1.35
CUX1-208ENST00000485792 PRUNE2Q8WUY3 3088 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 TTC3P53804 2025 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 ELP1O95163 1332 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 UMODL1Q5DID0 1318 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 KLF18A0A0U1RQI7 1052 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 A6NJR5 290 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 STXBP3O00186 592 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 SOX1O00570 391 aaPredicted RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 TLL1O43897 1013 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 CALML3P27482 149 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 PSMA5P28066 241 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 ADD1P35611 737 aaKnown RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 EPHB4P54760 987 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 TCTN1Q2MV58 587 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 USP17L6PQ6QN14 398 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 Q6ZUG5 572 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 CTCFLQ8NI51 663 aaPredicted RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 NSUN6Q8TEA1 469 aaKnown RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 SYMPKQ92797 1274 aaKnown RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 WNT8BQ93098 351 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 EMID1Q96A84 441 aaPredicted RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 ZNF274Q96GC6 653 aaPredicted RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 PDCD2LQ9BRP1 358 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 HTATIP2Q9BUP3 242 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 OSBPL7Q9BZF2 842 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 C11orf49Q9H6J7 331 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 CWC22Q9HCG8 908 aaKnown RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 VAT1LQ9HCJ6 419 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 PXMP2Q9NR77 195 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 RBM28Q9NW13 759 aaKnown RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 TMEM260Q9NX78 707 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 ZHX1Q9UKY1 873 aaPredicted RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 TPCN1Q9ULQ1 816 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 ISY1Q9ULR0 285 aaKnown RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 CNPY2Q9Y2B0 182 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 CTDP1Q9Y5B0 961 aaPredicted RBP6.61□□□□□ -1.35
CUX1-208ENST00000485792 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
CUX1-208ENST00000485792 KIAA1671Q9BY89 1806 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 TRIM43BA6NCK2 446 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 CCDC69A6NI79 296 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 hCG_1984214I3L0E3 225 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 M0R2N6 131 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 NKRFO15226 690 aaKnown RBP eCLIP6.6□□□□□ -1.35
CUX1-208ENST00000485792 ZBTB43O43298 467 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 PRPF3O43395 683 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 EIF3JO75822 258 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 ADH1BP00325 375 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 NR3C2P08235 984 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 TGFB3P10600 412 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 RARBP10826 455 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 FDPSP14324 419 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 IFNAR1P17181 557 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 SYN1P17600 705 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 EIF2AK2P19525 551 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 CASTP20810 708 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 PDIA3P30101 505 aaKnown RBP6.6□□□□□ -1.35
CUX1-208ENST00000485792 ICAM3P32942 547 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 BMP8BP34820 402 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 GGCXP38435 758 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 RFC5P40937 340 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 PSMC6P62333 389 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 TNFAIP2Q03169 654 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 ARHGAP1Q07960 439 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 SCRN1Q12765 414 aa6.6□□□□□ -1.35
CUX1-208ENST00000485792 PGM5Q15124 567 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms