RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 MMP3P08254 477 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 CCDC192P0DO97 292 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 ACRP10323 421 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 CHRM1P11229 460 aaPredicted RBP12.2□□□□□ -0.46
DDX56-212ENST00000485367 CBX1P83916 185 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 GABPB1Q06547 395 aaPredicted RBP12.2□□□□□ -0.46
DDX56-212ENST00000485367 DHX32Q7L7V1 743 aaKnown RBP12.2□□□□□ -0.46
DDX56-212ENST00000485367 VSIG10LQ86VR7 867 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 MICU3Q86XE3 530 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 CCDC82Q8N4S0 544 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 ZNF830Q96NB3 372 aaPredicted RBP12.2□□□□□ -0.46
DDX56-212ENST00000485367 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.465e-8■■■□□ 14.7
DDX56-212ENST00000485367 NOC4LQ9BVI4 516 aaKnown RBP12.2□□□□□ -0.46
DDX56-212ENST00000485367 OGFRQ9NZT2 677 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 UMODL1Q5DID0 1318 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 LAMA2P24043 3122 aaKnown RBP12.19□□□□□ -0.46
DDX56-212ENST00000485367 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 SORBS3O60504 671 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 F13A1P00488 732 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 SUPT20HL2P0C7V6 817 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 CYP2C9P11712 490 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 CCL23P55773 120 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
DDX56-212ENST00000485367 LAMC2Q13753 1193 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 KRT32Q14532 448 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 ADCK5Q3MIX3 580 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 C16orf59Q7L2K0 433 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 SGMS1Q86VZ5 419 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 DHX37Q8IY37 1157 aaKnown RBP12.19□□□□□ -0.46
DDX56-212ENST00000485367 SMARCC2Q8TAQ2 1214 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 CUL5Q93034 780 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 MTMR10Q9NXD2 777 aa12.19□□□□□ -0.46
DDX56-212ENST00000485367 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
DDX56-212ENST00000485367 RGS20O76081 388 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 CASTP20810 708 aaKnown RBP12.18□□□□□ -0.46
DDX56-212ENST00000485367 DGKDQ16760 1214 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 NFRKBQ6P4R8 1299 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 KCNV1Q6PIU1 500 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 USP17L6PQ6QN14 398 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 FAM161BQ96MY7 647 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 ARID3AQ99856 593 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 IL23AQ9NPF7 189 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 LIMCH1Q9UPQ0 1083 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 FAM193AP78312 1265 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 SMAD3P84022 425 aaKnown RBP12.18□□□□□ -0.46
DDX56-212ENST00000485367 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 FAM109BQ6ICB4 259 aaPredicted RBP12.18□□□□□ -0.46
DDX56-212ENST00000485367 ZNF365Q70YC5 407 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
DDX56-212ENST00000485367 TEX2Q8IWB9 1127 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 EMID1Q96A84 441 aaPredicted RBP12.18□□□□□ -0.46
DDX56-212ENST00000485367 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 PAXBP1Q9Y5B6 917 aa12.18□□□□□ -0.46
DDX56-212ENST00000485367 SMTNL1A8MU46 457 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 ZBTB43O43298 467 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 GGPS1O95749 300 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
DDX56-212ENST00000485367 PTPN11Q06124 597 aaPredicted RBP12.17□□□□□ -0.46
DDX56-212ENST00000485367 RTN1Q16799 776 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 CELF3Q5SZQ8 465 aaKnown RBP12.17□□□□□ -0.46
DDX56-212ENST00000485367 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 MYSM1Q5VVJ2 828 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 PSRC1Q6PGN9 363 aaPredicted RBP12.17□□□□□ -0.46
DDX56-212ENST00000485367 APOA5Q6Q788 366 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 PPTC7Q8NI37 304 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 KAT2BQ92831 832 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 GPKOWQ92917 476 aaPredicted RBP eCLIP12.17□□□□□ -0.465e-7■■■■■ 43.5
DDX56-212ENST00000485367 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
DDX56-212ENST00000485367 SPATA33Q96N06 139 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 WNT8AQ9H1J5 351 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 KCNF1Q9H3M0 494 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 RTEL1Q9NZ71 1219 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 CGNQ9P2M7 1197 aaKnown RBP12.17□□□□□ -0.46
DDX56-212ENST00000485367 SMC3Q9UQE7 1217 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
DDX56-212ENST00000485367 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 PIK3CDO00329 1044 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 FGBP02675 491 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 ZNF286BP0CG31 522 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 CPA1P15085 419 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 SYT1P21579 422 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 UBA1P22314 1058 aaKnown RBP12.16□□□□□ -0.46
DDX56-212ENST00000485367 MRPS9P82933 396 aaKnown RBP12.16□□□□□ -0.46
DDX56-212ENST00000485367 SP2Q02086 613 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 GNPTABQ3T906 1256 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 SCLYQ96I15 445 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
DDX56-212ENST00000485367 MLXIPQ9HAP2 919 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
DDX56-212ENST00000485367 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
DDX56-212ENST00000485367 FRMPD4Q14CM0 1322 aa12.16□□□□□ -0.46
DDX56-212ENST00000485367 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.15□□□□□ -0.46
DDX56-212ENST00000485367 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.15□□□□□ -0.46
DDX56-212ENST00000485367 GOLGA8AA7E2F4 631 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms