RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 SPATA31C2B4DYI2 1134 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 H0YGN5 161 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 ARVCFO00192 962 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 CTAGE5O15320 804 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 GGPS1O95749 300 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 CLK2P49760 499 aaKnown RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 PURAQ00577 322 aaKnown RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 ARHGAP1Q07960 439 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 MTMR1Q13613 665 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 ITGA7Q13683 1181 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 TRIM29Q14134 588 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 SNX17Q15036 470 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 TRIM60Q495X7 471 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 CELF3Q5SZQ8 465 aaKnown RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 TMEM92Q6UXU6 159 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 NECAB1Q8N987 351 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 AFG1LQ8WV93 481 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 EMID1Q96A84 441 aaPredicted RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 PGBD1Q96JS3 809 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 SPATA33Q96N06 139 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 LBHD1Q9BQE6 289 aaPredicted RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 KATNAL1Q9BW62 490 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 BRMS1Q9HCU9 246 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 PRDM5Q9NQX1 630 aaPredicted RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 SH2B1Q9NRF2 756 aaPredicted RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 TMEM260Q9NX78 707 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 ORC3Q9UBD5 711 aaPredicted RBP8.92□□□□□ -0.98
MACF1-220ENST00000485063 PCDHA4Q9UN74 947 aa8.92□□□□□ -0.98
MACF1-220ENST00000485063 DOCK5Q9H7D0 1870 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 PQBP1O60828 265 aaKnown RBP8.91□□□□□ -0.98
MACF1-220ENST00000485063 PPFIA4O75335 1185 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 RGS20O76081 388 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 MMP3P08254 477 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 CLTBP09497 229 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 SYN1P17600 705 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 UBA1P22314 1058 aaKnown RBP8.91□□□□□ -0.98
MACF1-220ENST00000485063 SREBF1P36956 1147 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 MCM2P49736 904 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 CHMP4BP1P59074 171 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 ARHGAP4P98171 946 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 TLE2Q04725 743 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 FAM47CQ5HY64 1035 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 BLIDQ8IZY5 108 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 PPTC7Q8NI37 304 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 TOX2Q96NM4 488 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 KIF2CQ99661 725 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 SENP7Q9BQF6 1050 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 MXRA8Q9BRK3 442 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 SDF4Q9BRK5 362 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 ALG1Q9BT22 464 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 JADE2Q9NQC1 790 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 TCEAL9Q9UHQ7 104 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 ZMYND8Q9ULU4 1186 aaPredicted RBP8.91□□□□□ -0.98
MACF1-220ENST00000485063 UBIAD1Q9Y5Z9 338 aa8.91□□□□□ -0.98
MACF1-220ENST00000485063 SORBS3O60504 671 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 LARGE1O95461 756 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 SUPT20HL2P0C7V6 817 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 RAG1P15918 1043 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 PTGS1P23219 599 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 PSMC6P62333 389 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 HMGN5P82970 282 aaKnown RBP8.9□□□□□ -0.98
MACF1-220ENST00000485063 SETQ01105 290 aaPredicted RBP8.9□□□□□ -0.98
MACF1-220ENST00000485063 SP2Q02086 613 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 PTPN11Q06124 597 aaPredicted RBP8.9□□□□□ -0.98
MACF1-220ENST00000485063 CEP55Q53EZ4 464 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 METTL7BQ6UX53 244 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 CYFIP1Q7L576 1253 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 NIPA1Q7RTP0 329 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 ANKRD33Q7Z3H0 272 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 CCDC83Q8IWF9 413 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 FAM184AQ8NB25 1140 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 DAGLBQ8NCG7 672 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 TBC1D32Q96NH3 1257 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 LLPHQ9BRT6 129 aaKnown RBP8.9□□□□□ -0.98
MACF1-220ENST00000485063 BACH2Q9BYV9 841 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 NOD1Q9Y239 953 aa8.9□□□□□ -0.98
MACF1-220ENST00000485063 CCDC194A0A1B0GVG4 234 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 CTDNEP1O95476 244 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 CYP3A4P08684 503 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 ITGB5P18084 799 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 CDK7P50613 346 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 USP11P51784 963 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 SP4Q02446 784 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 NONOQ15233 471 aaKnown RBP eCLIP8.89□□□□□ -0.99
MACF1-220ENST00000485063 SAFBQ15424 915 aaKnown RBP eCLIP8.89□□□□□ -0.99
MACF1-220ENST00000485063 HSDL1Q3SXM5 330 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
MACF1-220ENST00000485063 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 NFRKBQ6P4R8 1299 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 KRT25Q7Z3Z0 450 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 PLA2G4DQ86XP0 818 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 ZNF687Q8N1G0 1237 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 C7orf31Q8N865 590 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 SLC43A3Q8NBI5 491 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 NSUN7Q8NE18 718 aaKnown RBP8.89□□□□□ -0.99
MACF1-220ENST00000485063 RASGRP4Q8TDF6 673 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 AIFM3Q96NN9 605 aa8.89□□□□□ -0.99
MACF1-220ENST00000485063 PHF20Q9BVI0 1012 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms