RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 SPTBN4Q9H254 2564 aa12.71□□□□□ -0.38
SMARCC1-205ENST00000483847 KMT2EQ8IZD2 1858 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 ZDBF2Q9HCK1 2354 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 A0A0D9SFI3 127 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 STXBP3O00186 592 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 NCK2O43639 380 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 CFBP00751 764 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 SMIM10L2AP0DMW4 78 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 SMIM10L2BP0DMW5 78 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 BMPR1AP36894 532 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 TCF15Q12870 199 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 SMAD4Q13485 552 aaKnown RBP12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 CELF3Q5SZQ8 465 aaKnown RBP12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 TRIM67Q6ZTA4 783 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 BMP8AQ7Z5Y6 402 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 FIBCD1Q8N539 461 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 IL31RAQ8NI17 732 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 RNPEPQ9H4A4 650 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
SMARCC1-205ENST00000483847 NEDD4P46934 1319 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 SALL3Q9BXA9 1300 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 TMEM221A6NGB7 291 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 H3BRB1 525 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 M0R296 226 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 ST18O60284 1047 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 MX1P20591 662 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 UBA1P22314 1058 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 PTPN5P54829 565 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 CAMK1Q14012 370 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 MFSD6Q6ZSS7 791 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 ZNF589Q86UQ0 364 aaPredicted RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 PBXIP1Q96AQ6 731 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 PDCD2LQ9BRP1 358 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 TUT1Q9H6E5 874 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 JMJD4Q9H9V9 463 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 VAT1LQ9HCJ6 419 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 ALG13Q9NP73 1137 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 HELLSQ9NRZ9 838 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 CD207Q9UJ71 328 aa12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-205ENST00000483847 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 LGALS2P05162 132 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 RB1P06400 928 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 HSD17B4P51659 736 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 ADAM15Q13444 863 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 MSLNLQ96KJ4 702 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 C11orf84Q9BUA3 381 aaPredicted RBP12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 LMAN2LQ9H0V9 348 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 SETD4Q9NVD3 440 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 DOCK5Q9H7D0 1870 aa12.68□□□□□ -0.38
SMARCC1-205ENST00000483847 CACNA1HO95180 2353 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 ADGRA3Q8IWK6 1321 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 CAND2O75155 1236 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 DNAJB1P25685 340 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 GHRHRQ02643 423 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 PGM5Q15124 567 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 ADGRD2Q7Z7M1 963 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 VSIG10LQ86VR7 867 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 APBB2Q92870 758 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 CLEC1BQ9P126 229 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 TELO2Q9Y4R8 837 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 KIAA1671Q9BY89 1806 aa12.67□□□□□ -0.38
SMARCC1-205ENST00000483847 LOC730098B7Z3J9 87 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 EYA4O95677 639 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 CHRNA1P02708 482 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 MMP1P03956 469 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 NDUFV1P49821 464 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 VCPP55072 806 aaKnown RBP12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 ZXDAP98168 799 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 MCMDC2Q4G0Z9 681 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 FAM26DQ5JW98 314 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 KCNV1Q6PIU1 500 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 SUGP1Q8IWZ8 645 aaKnown RBP12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 FBXL6Q8N531 539 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 ESR2Q92731 530 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
SMARCC1-205ENST00000483847 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 MYO15AQ9UKN7 3530 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms