RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 RABGGTBP53611 331 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 GPNMBQ14956 572 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 PPP2R2DQ66LE6 453 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 PPP1R18Q6NYC8 613 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 CYFIP1Q7L576 1253 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 SKAP1Q86WV1 359 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 RASEFQ8IZ41 740 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 KCNB2Q92953 911 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 PRDM12Q9H4Q4 367 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 CNTNAP5Q8WYK1 1306 aa22.8■■□□□ 1.24
HPS4-213ENST00000483631 C17orf102A2RUQ5 167 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 SPDYE3A6NKU9 549 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 KIF28PB7ZC32 967 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 ZBTB43O43298 467 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 CAND2O75155 1236 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 RTN1Q16799 776 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 TRAF7Q6Q0C0 670 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 EHMT1Q9H9B1 1298 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 ZNF215Q9UL58 517 aaPredicted RBP22.79■■□□□ 1.24
HPS4-213ENST00000483631 EMSYQ7Z589 1322 aa22.79■■□□□ 1.24
HPS4-213ENST00000483631 ABHD14A-ACY1A0A1B0GW23 586 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 SORBS3O60504 671 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 GNAT1P11488 350 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 KCNJ6P48051 423 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 ADCK5Q3MIX3 580 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 HERC6Q8IVU3 1022 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 CCDC82Q8N4S0 544 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 GLT8D2Q9H1C3 349 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 BCAS3Q9H6U6 928 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 PTPRSQ13332 1948 aa22.78■■□□□ 1.24
HPS4-213ENST00000483631 NBNO60934 754 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 SMIM10L2AP0DMW4 78 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 SMIM10L2BP0DMW5 78 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 FUT2Q10981 343 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 HIC1Q14526 733 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 HEATR3Q7Z4Q2 680 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 RAB11FIP4Q86YS3 637 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 ATP6V0A1Q93050 837 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 CCDC136Q96JN2 1154 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 BRPF3Q9ULD4 1205 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 PCDHA6Q9UN73 950 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 PCDHA8Q9Y5H6 950 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 UBIAD1Q9Y5Z9 338 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 EYSQ5T1H1 3165 aa22.77■■□□□ 1.24
HPS4-213ENST00000483631 FOSP01100 380 aaPredicted RBP22.76■■□□□ 1.23
HPS4-213ENST00000483631 KCNA2P16389 499 aa22.76■■□□□ 1.23
HPS4-213ENST00000483631 WDR5P61964 334 aaKnown RBP22.76■■□□□ 1.23
HPS4-213ENST00000483631 ZNF200P98182 395 aaPredicted RBP22.76■■□□□ 1.23
HPS4-213ENST00000483631 ZNF618Q5T7W0 954 aa22.76■■□□□ 1.23
HPS4-213ENST00000483631 FBXL16Q8N461 479 aa22.76■■□□□ 1.23
HPS4-213ENST00000483631 WNT8BQ93098 351 aa22.76■■□□□ 1.23
HPS4-213ENST00000483631 RNPEPQ9H4A4 650 aa22.76■■□□□ 1.23
HPS4-213ENST00000483631 RIC8AQ9NPQ8 531 aa22.76■■□□□ 1.23
HPS4-213ENST00000483631 PRUNE2Q8WUY3 3088 aa22.76■■□□□ 1.23
HPS4-213ENST00000483631 CCDC196A0A1B0GTZ2 297 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 hCG_1642624A0A1W2PR95 340 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 CA3P07451 260 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 MYOGP15173 224 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 ITGB5P18084 799 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 ADGRE1Q14246 886 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 WWC2Q6AWC2 1192 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 COL25A1Q9BXS0 654 aaPredicted RBP22.75■■□□□ 1.23
HPS4-213ENST00000483631 JADE2Q9NQC1 790 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 CHD7Q9P2D1 2997 aa22.75■■□□□ 1.23
HPS4-213ENST00000483631 MICAL3Q7RTP6 2002 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 KLF18A0A0U1RQI7 1052 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 GOLGA8AA7E2F4 631 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 GOLGA8BA8MQT2 603 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 RSPH10B2B2RC85 870 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 EPB41L2O43491 1005 aaKnown RBP22.74■■□□□ 1.23
HPS4-213ENST00000483631 LGR5O75473 907 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 RSPH10BP0C881 870 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 POU3F3P20264 500 aaPredicted RBP22.74■■□□□ 1.23
HPS4-213ENST00000483631 HSPA4P34932 840 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 NAPAP54920 295 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 MTMR1Q13613 665 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 IKBKEQ14164 716 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 UBE2SQ16763 222 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 TCEANC2Q96MN5 208 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 NRCAMQ92823 1304 aa22.74■■□□□ 1.23
HPS4-213ENST00000483631 THPOP40225 353 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 ADAM17P78536 824 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 MBTPS1Q14703 1052 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 USP38Q8NB14 1042 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 SEPT1Q8WYJ6 367 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 SYMPKQ92797 1274 aaKnown RBP22.73■■□□□ 1.23
HPS4-213ENST00000483631 FAM217BQ9NTX9 383 aaPredicted RBP22.73■■□□□ 1.23
HPS4-213ENST00000483631 BARHL2Q9NY43 387 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 V9GY48 417 aaPredicted RBP22.73■■□□□ 1.23
HPS4-213ENST00000483631 TTC28Q96AY4 2481 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 NID2Q14112 1375 aa22.73■■□□□ 1.23
HPS4-213ENST00000483631 TREHO43280 583 aa22.72■■□□□ 1.23
HPS4-213ENST00000483631 TLL1O43897 1013 aa22.72■■□□□ 1.23
HPS4-213ENST00000483631 ATP9AO75110 1047 aa22.72■■□□□ 1.23
HPS4-213ENST00000483631 REC8O95072 547 aa22.72■■□□□ 1.23
HPS4-213ENST00000483631 TCF7P36402 384 aaPredicted RBP22.72■■□□□ 1.23
HPS4-213ENST00000483631 FGD1P98174 961 aa22.72■■□□□ 1.23
HPS4-213ENST00000483631 AP3B2Q13367 1082 aa22.72■■□□□ 1.23
HPS4-213ENST00000483631 STXBP3O00186 592 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 IGFBP4P22692 258 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms