RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PHF19Q5T6S3 580 aa5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 RBM12BQ8IXT5 1001 aaKnown RBP5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 PIP4K2CQ8TBX8 421 aa5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 MBD6Q96DN6 1003 aa5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 SAMD11Q96NU1 681 aa5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 SLC6A20Q9NP91 592 aa5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 GPR27Q9NS67 375 aa5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 ASH2LQ9UBL3 628 aa5.08□□□□□ -1.6
LAPTM4A-202ENST00000483117 KRIT1O00522 736 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 ZNF20P17024 532 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 CPZQ66K79 652 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 KCNT2Q6UVM3 1135 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 GLB1LQ6UWU2 654 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 PROSER1Q86XN7 944 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 PHOSPHO1Q8TCT1 267 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 CLEC4DQ8WXI8 215 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 TMEM168Q9H0V1 697 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 PPP4R1LQ9P1A2 415 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 ST6GALNAC2Q9UJ37 374 aa5.07□□□□□ -1.6
LAPTM4A-202ENST00000483117 OVOL3O00110 214 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 PRODHO43272 600 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 KLF4O43474 513 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 LAMTOR5O43504 91 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 MAFKO60675 156 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 LTFP02788 710 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 COL6A2P12110 1019 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 HSP90AA2PQ14568 343 aaPredicted RBP5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 TRMT10BQ6PF06 316 aaKnown RBP5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 TTC9BQ8N6N2 239 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 CHST13Q8NET6 341 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 IGDCC4Q8TDY8 1250 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 TMEM209Q96SK2 561 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 AARSD1Q9BTE6 412 aaKnown RBP5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 ARHGEF4Q9NR80 690 aa5.06□□□□□ -1.6
LAPTM4A-202ENST00000483117 BLACEA4D250 179 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 MATN3O15232 486 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 TNFRSF1AP19438 455 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 NTRK3Q16288 839 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 CYP4F22Q6NT55 531 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 RSPO2Q6UXX9 243 aaPredicted RBP5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 OTOP3Q7RTS5 596 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 SGSM3Q96HU1 749 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 KCNJ15Q99712 375 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 PTPN18Q99952 460 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 C1QTNF3Q9BXJ4 246 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 FTSJ1Q9UET6 329 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 ZDHHC9Q9Y397 364 aa5.05□□□□□ -1.6
LAPTM4A-202ENST00000483117 NKRFO15226 690 aaKnown RBP eCLIP5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 CYP7B1O75881 506 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 PABPC1P11940 636 aaKnown RBP5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 COL6A1P12109 1028 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 GRK2P25098 689 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 GRK3P35626 688 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 NFATC3Q12968 1075 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 TUSC3Q13454 348 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 ICAM4Q14773 271 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 SURF1Q15526 300 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 YOD1Q5VVQ6 348 aaPredicted RBP5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 VASNQ6EMK4 673 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 PKN3Q6P5Z2 889 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 LBX2Q6XYB7 198 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 PLEKHH3Q7Z736 793 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 TRIM48Q8IWZ4 208 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 KBTBD2Q8IY47 623 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 NUDT10Q8NFP7 164 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 TTLL11Q8NHH1 800 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 DCAF4Q8WV16 495 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 OSBP2Q969R2 916 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 NUDT11Q96G61 164 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 WRNIP1Q96S55 665 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 GMLQ99445 158 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 HSPBP1Q9NZL4 362 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 TELO2Q9Y4R8 837 aa5.04□□□□□ -1.6
LAPTM4A-202ENST00000483117 NPEPPSL1A6NEC2 478 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 GPR42O15529 346 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 B4GALT4O60513 344 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 FGFR1P11362 822 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 GNAT1P11488 350 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 PPP2CBP62714 309 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 PPP2CAP67775 309 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 PAN2Q504Q3 1202 aaKnown RBP5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 NSMFQ6X4W1 530 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 KLHL36Q8N4N3 616 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 DTX3Q8N9I9 347 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 SLC43A3Q8NBI5 491 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 DLL4Q9NR61 685 aa5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 CCDC9Q9Y3X0 531 aaKnown RBP5.03□□□□□ -1.6
LAPTM4A-202ENST00000483117 IQCA1LA6NCM1 817 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 C1QTNF3-AMACRE9PGA6 284 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 SOD2P04179 222 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 CKMP06732 381 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 FAHP16930 419 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 GLRBP48167 497 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 ZXDAP98168 799 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 SKIDA1Q1XH10 827 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 KIZQ2M2Z5 673 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 ARHGEF18Q6ZSZ5 1173 aa5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 UHMK1Q8TAS1 419 aaKnown RBP5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 DVL3Q92997 716 aaPredicted RBP5.02□□□□□ -1.61
LAPTM4A-202ENST00000483117 BARX1Q9HBU1 254 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms