RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 LHX8Q68G74 356 aa17.34■□□□□ 0.37
CCM2-215ENST00000482714 DYNC1LI2O43237 492 aaPredicted RBP17.33■□□□□ 0.37
CCM2-215ENST00000482714 KPNA6O60684 536 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 PSMD10O75832 226 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 GGPS1O95749 300 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 NASPP49321 788 aaPredicted RBP17.33■□□□□ 0.37
CCM2-215ENST00000482714 ATP2C1P98194 919 aaPredicted RBP17.33■□□□□ 0.37
CCM2-215ENST00000482714 KRT76Q01546 638 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 PDIA5Q14554 519 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 SF3A1Q15459 793 aaKnown RBP17.33■□□□□ 0.37
CCM2-215ENST00000482714 ZNF746Q6NUN9 644 aaPredicted RBP17.33■□□□□ 0.37
CCM2-215ENST00000482714 ARRDC4Q8NCT1 418 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 RDM1Q8NG50 284 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 HAS1Q92839 578 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 TEKT3Q9BXF9 490 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 UNC93B1Q9H1C4 597 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 UPF3AQ9H1J1 476 aaKnown RBP17.33■□□□□ 0.37
CCM2-215ENST00000482714 TCEAL9Q9UHQ7 104 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 STK24Q9Y6E0 443 aa17.33■□□□□ 0.37
CCM2-215ENST00000482714 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.32■□□□□ 0.36
CCM2-215ENST00000482714 A6NJR5 290 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 WNT7AO00755 349 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 GAS7O60861 476 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 FARP2O94887 1054 aaPredicted RBP17.32■□□□□ 0.36
CCM2-215ENST00000482714 YEATS4O95619 227 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 OR52Z1P0C646 297 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 CPT1AP50416 773 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 ARHGAP1Q07960 439 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 SLC39A14Q15043 492 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 MTFR1Q15390 333 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 CYFIP1Q7L576 1253 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 SMAP1Q8IYB5 467 aaPredicted RBP17.32■□□□□ 0.36
CCM2-215ENST00000482714 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 USP28Q96RU2 1077 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 TMEM106CQ9BVX2 250 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 JPH1Q9HDC5 661 aaPredicted RBP17.32■□□□□ 0.36
CCM2-215ENST00000482714 SLC9A2Q9UBY0 812 aa17.32■□□□□ 0.36
CCM2-215ENST00000482714 ZEB2O60315 1214 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 ATG7O95352 703 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 SGPL1O95470 568 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 CST5P28325 142 aaPredicted RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 SFNP31947 248 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 KRT85P78386 507 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 FAM173BQ6P4H8 233 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 B3GNT9Q6UX72 402 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 DTHD1Q6ZMT9 781 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 RNF180Q86T96 592 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 TLK2Q86UE8 772 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 OR6J1Q8NGC5 347 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 SEPT1Q8WYJ6 367 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 FERMT2Q96AC1 680 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 TSEN34Q9BSV6 310 aaKnown RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 SCAND2PQ9GZW5 306 aaPredicted RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 XPNPEP3Q9NQH7 507 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 OGDHLQ9ULD0 1010 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 PPP6R2O75170 966 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 TXKP42681 527 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCM2-215ENST00000482714 PTPAQ15257 358 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 PCSK9Q8NBP7 692 aaKnown RBP17.31■□□□□ 0.36
CCM2-215ENST00000482714 LINC00301Q8NCQ3 95 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 KLHDC9Q8NEP7 349 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 SPATA33Q96N06 139 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 CRISPLD2Q9H0B8 497 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 RCOR1Q9UKL0 485 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
CCM2-215ENST00000482714 NOP56O00567 594 aaKnown RBP17.3■□□□□ 0.36
CCM2-215ENST00000482714 ADCY6O43306 1168 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 ADAMTS4O75173 837 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 HOXD8P13378 290 aaPredicted RBP17.3■□□□□ 0.36
CCM2-215ENST00000482714 GJA8P48165 433 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 JAK3P52333 1124 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 NBR1Q14596 966 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 DGKDQ16760 1214 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 COPS5Q92905 334 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 TFIP11Q9UBB9 837 aaKnown RBP17.3■□□□□ 0.36
CCM2-215ENST00000482714 PCDHA10Q9Y5I2 948 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 HTTP42858 3142 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 LRRC37A2A6NM11 1700 aa17.3■□□□□ 0.36
CCM2-215ENST00000482714 DNM1Q05193 864 aaKnown RBP17.29■□□□□ 0.36
CCM2-215ENST00000482714 HSDL1Q3SXM5 330 aa17.29■□□□□ 0.36
CCM2-215ENST00000482714 GNASQ5JWF2 1037 aa17.29■□□□□ 0.36
CCM2-215ENST00000482714 TMEM63BQ5T3F8 832 aa17.29■□□□□ 0.36
CCM2-215ENST00000482714 ANKLE1Q8NAG6 615 aa17.29■□□□□ 0.36
CCM2-215ENST00000482714 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
CCM2-215ENST00000482714 AK8Q96MA6 479 aa17.29■□□□□ 0.36
CCM2-215ENST00000482714 GPR20Q99678 358 aa17.29■□□□□ 0.36
CCM2-215ENST00000482714 SRPRBQ9Y5M8 271 aaKnown RBP17.29■□□□□ 0.36
CCM2-215ENST00000482714 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms