RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CHD7Q9P2D1 2997 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 C17orf102A2RUQ5 167 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 CXCL10P02778 98 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 LGALS2P05162 132 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 CA3P07451 260 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 ZNF200P98182 395 aaPredicted RBP15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 IKBKEQ14164 716 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 ADGRE1Q14246 886 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 TCTN1Q2MV58 587 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 ZNF618Q5T7W0 954 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 SGMS1Q86VZ5 419 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 HERC6Q8IVU3 1022 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 ATP6V0A1Q93050 837 aa15.46■□□□□ 0.07
CTDSP1-208ENST00000482272 SPTBN5Q9NRC6 3674 aaKnown RBP15.46■□□□□ 0.06
CTDSP1-208ENST00000482272 ABHD14A-ACY1A0A1B0GW23 586 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 NBNO60934 754 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 EFCAB14O75071 495 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 GNAT1P11488 350 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 CCDC85BQ15834 202 aaPredicted RBP15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 DHX32Q7L7V1 743 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 USP38Q8NB14 1042 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 CDHR1Q96JP9 859 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 GPR20Q99678 358 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 ZBED2Q9BTP6 218 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 RNPEPQ9H4A4 650 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 RBM28Q9NW13 759 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 BRPF3Q9ULD4 1205 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 VCANP13611 3396 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 REV3LO60673 3130 aa15.45■□□□□ 0.06
CTDSP1-208ENST00000482272 SPDYE3A6NKU9 549 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 MAFGO15525 162 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 TLL1O43897 1013 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 CDC45O75419 566 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 THPOP40225 353 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 WDR5P61964 334 aaKnown RBP15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 EXOSC10Q01780 885 aaKnown RBP15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 KRT32Q14532 448 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 TRIM71Q2Q1W2 868 aaKnown RBP15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 TSGA10IPQ3SY00 556 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 TRAF7Q6Q0C0 670 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 TMTC3Q6ZXV5 915 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 SERINC5Q86VE9 423 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 MICU3Q86XE3 530 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 GPRASP2Q96D09 838 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 TSPYL2Q9H2G4 693 aaPredicted RBP15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 EHMT1Q9H9B1 1298 aa15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 ZNF215Q9UL58 517 aaPredicted RBP15.44■□□□□ 0.06
CTDSP1-208ENST00000482272 EMSYQ7Z589 1322 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 CNTNAP5Q8WYK1 1306 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 RSPH10B2B2RC85 870 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 GTPBP6O43824 516 aaPredicted RBP15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 ARHGEF15O94989 841 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 HMGB1P09429 215 aaKnown RBP15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 RSPH10BP0C881 870 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 SMIM10L2AP0DMW4 78 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 SMIM10L2BP0DMW5 78 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 CPA1P15085 419 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 FUT2Q10981 343 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 UBE2SQ16763 222 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 TJAP1Q5JTD0 557 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 UTP14CQ5TAP6 766 aaKnown RBP15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 ATXN2LQ8WWM7 1075 aaKnown RBP15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 PCDHA6Q9UN73 950 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 PCDHA8Q9Y5H6 950 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 SIP14410 1827 aa15.43■□□□□ 0.06
CTDSP1-208ENST00000482272 ZBTB43O43298 467 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 LGR5O75473 907 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 SP4Q02446 784 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 TAP1Q03518 808 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 SEPT1Q8WYJ6 367 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 OSBPL7Q9BZF2 842 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 CERS4Q9HA82 394 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 FAM217BQ9NTX9 383 aaPredicted RBP15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 A0A0C4DFX4 3053 aa15.42■□□□□ 0.06
CTDSP1-208ENST00000482272 TREHO43280 583 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 ATP9AO75110 1047 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 CAND2O75155 1236 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 POU3F3P20264 500 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 HOXC8P31273 242 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 FGD1P98174 961 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 MTMR1Q13613 665 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 MBTPS1Q14703 1052 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 RTN1Q16799 776 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 TRIM50Q86XT4 487 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 TEX2Q8IWB9 1127 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 RAD9AQ99638 391 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 PRDM6Q9NQX0 595 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 SETD4Q9NVD3 440 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 THEGQ9P2T0 379 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 UBIAD1Q9Y5Z9 338 aa15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 COL4A4P53420 1690 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-208ENST00000482272 hCG_1984214I3L0E3 225 aa15.4■□□□□ 0.06
CTDSP1-208ENST00000482272 RFXAPO00287 272 aa15.4■□□□□ 0.06
CTDSP1-208ENST00000482272 ADAMTS3O15072 1205 aa15.4■□□□□ 0.06
CTDSP1-208ENST00000482272 GJB5O95377 273 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms