RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
CNKSR1-207ENST00000482227 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
CNKSR1-207ENST00000482227 GRIK3Q13003 919 aa17.06■□□□□ 0.32
CNKSR1-207ENST00000482227 PPP1R7Q15435 360 aa17.06■□□□□ 0.32
CNKSR1-207ENST00000482227 NSMCE1Q8WV22 266 aa17.06■□□□□ 0.32
CNKSR1-207ENST00000482227 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
CNKSR1-207ENST00000482227 TBC1D5Q92609 795 aa17.06■□□□□ 0.32
CNKSR1-207ENST00000482227 PCDH11XQ9BZA7 1347 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 PCDH11YQ9BZA8 1340 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 A0A087X0T9 212 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 KCNK3O14649 394 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 SERPING1P05155 500 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 FAM228BP0C875 321 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 ERMARDQ5T6L9 678 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 CHMP6Q96FZ7 201 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 SLC12A4Q9UP95 1085 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 SART1O43290 800 aaKnown RBP17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 PRPHP41219 470 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 SLC18A3Q16572 532 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 KIAA0753Q2KHM9 967 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 TMC3Q7Z5M5 1100 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 ZNF317Q96PQ6 595 aaPredicted RBP17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 XPO6Q96QU8 1125 aaKnown RBP17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 KCNG1Q9UIX4 513 aa17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
CNKSR1-207ENST00000482227 CES2O00748 559 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 ZBTB48P10074 688 aaPredicted RBP17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 MYO1EQ12965 1108 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 FAM83BQ5T0W9 1011 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 CRELD2Q6UXH1 353 aaPredicted RBP17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 SYN2Q92777 582 aaPredicted RBP17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 TLCD1Q96CP7 247 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 THOC1Q96FV9 657 aaKnown RBP17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 AP1M1Q9BXS5 423 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 GOLPH3Q9H4A6 298 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 LRP5O75197 1615 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 SFMBT2Q5VUG0 894 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 RSRC1Q96IZ7 334 aaKnown RBP17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 ATP6V0A2Q9Y487 856 aa17.04■□□□□ 0.32
CNKSR1-207ENST00000482227 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 LAD1O00515 517 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 DAPK3O43293 454 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 BUB1BO60566 1050 aaPredicted RBP17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 IRX1P78414 480 aaPredicted RBP17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 RPS6KA1Q15418 735 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 KRT71Q3SY84 523 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 CCDC197Q8NCU1 140 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 ACTRT1Q8TDG2 376 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 AK8Q96MA6 479 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 PSMD1Q99460 953 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 BRIP1Q9BX63 1249 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 FAM129AQ9BZQ8 928 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 DDX47Q9H0S4 455 aaKnown RBP17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 CEP72Q9P209 647 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 L3MBTL1Q9Y468 752 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 F8VZ95 297 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 KIF3CO14782 793 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 KIF4AO95239 1232 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 RIPK1Q13546 671 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 MTMR3Q13615 1198 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 TCP11Q8WWU5 503 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 KCNMB3Q9NPA1 279 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 ADAMTS1Q9UHI8 967 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 ARAP2Q8WZ64 1704 aa17.03■□□□□ 0.32
CNKSR1-207ENST00000482227 USP17L12C9JPN9 530 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 USP17L21D6R901 530 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 USP11P51784 963 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 SLC35G1Q2M3R5 365 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 CCDC63Q8NA47 563 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 GLIS3Q8NEA6 775 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 TAF4BQ92750 862 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 CENPTQ96BT3 561 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 SWAP70Q9UH65 585 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 C15orf41Q9Y2V0 281 aa17.02■□□□□ 0.32
CNKSR1-207ENST00000482227 MYMKA6NI61 221 aa17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 CEP104O60308 925 aa17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 CTNND1O60716 968 aaKnown RBP17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 ANP32DO95626 131 aa17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 INHBEP58166 350 aa17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 POLR2FP61218 127 aaKnown RBP17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 PIGWQ7Z7B1 504 aa17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 GUF1Q8N442 669 aaKnown RBP17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 LUC7LQ9NQ29 371 aaKnown RBP17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 AMACRQ9UHK6 382 aa17.02■□□□□ 0.31
CNKSR1-207ENST00000482227 GSTA1P08263 222 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 CLTAP09496 248 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 ITGA4P13612 1032 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms