RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 USH1GQ495M9 461 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 BTNL9Q6UXG8 535 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 C16orf59Q7L2K0 433 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 PLEKHM2Q8IWE5 1019 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 SMC5Q8IY18 1101 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 TMEM199Q8N511 208 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 TSC1Q92574 1164 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 UBA5Q9GZZ9 404 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 TRPV6Q9H1D0 765 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 EPHX3Q9H6B9 360 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 DIAPH3Q9NSV4 1193 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 UMODL1Q5DID0 1318 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 NAV2Q8IVL1 2488 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.54□□□□□ -0.72
HLA-B-253ENST00000481849 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.54□□□□□ -0.72
HLA-B-253ENST00000481849 ZEB2O60315 1214 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 MYL3P08590 195 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
HLA-B-253ENST00000481849 CCL23P55773 120 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 NKX3-2P78367 333 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 NUCB1Q02818 461 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 GRIN2CQ14957 1233 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 AGERQ15109 404 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 TMEM240Q5SV17 173 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 IQSEC1Q6DN90 963 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 RNF207Q6ZRF8 634 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 ZNF365Q70YC5 407 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 PPP1R13LQ8WUF5 828 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 CLEC4DQ8WXI8 215 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 ESR2Q92731 530 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 WDR11Q9BZH6 1224 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 HIPK3Q9H422 1215 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
HLA-B-253ENST00000481849 ADD3Q9UEY8 706 aaKnown RBP10.54□□□□□ -0.72
HLA-B-253ENST00000481849 GRIN2DO15399 1336 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 ZMYM6O95789 1325 aa10.54□□□□□ -0.72
HLA-B-253ENST00000481849 PLXNA1Q9UIW2 1896 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 XIRP2A4UGR9 3374 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 MYH4Q9Y623 1939 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 B4E1Z4 1266 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 B4GALT4O60513 344 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 CABYRO75952 493 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 CD4P01730 458 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 CHMP4BP1P59074 171 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 RPS6P62753 249 aaKnown RBP10.53□□□□□ -0.72
HLA-B-253ENST00000481849 PDE4DQ08499 809 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 ARID5BQ14865 1188 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 SLC43A3Q8NBI5 491 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 OR6J1Q8NGC5 347 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 MORC4Q8TE76 937 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
HLA-B-253ENST00000481849 TIFAQ96CG3 184 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 TTC14Q96N46 770 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 ASB2Q96Q27 587 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 KAT14Q9H8E8 782 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 C11orf16Q9NQ32 467 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 MAP10Q9P2G4 905 aa10.53□□□□□ -0.72
HLA-B-253ENST00000481849 NXF1Q9UBU9 619 aaKnown RBP10.53□□□□□ -0.72
HLA-B-253ENST00000481849 PTPRZ1P23471 2315 aaPredicted RBP10.53□□□□□ -0.72
HLA-B-253ENST00000481849 NCOR2Q9Y618 2525 aa10.52□□□□□ -0.72
HLA-B-253ENST00000481849 DHX16O60231 1041 aaKnown RBP10.52□□□□□ -0.73
HLA-B-253ENST00000481849 SNHG28P0DPA3 235 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 PCP11498 1178 aaKnown RBP10.52□□□□□ -0.73
HLA-B-253ENST00000481849 DUSP28Q4G0W2 176 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 PSRC1Q6PGN9 363 aaPredicted RBP10.52□□□□□ -0.73
HLA-B-253ENST00000481849 PNMA1Q8ND90 353 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 TBC1D5Q92609 795 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 COPS5Q92905 334 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 PBX4Q9BYU1 374 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 ZNF576Q9H609 170 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 VAT1LQ9HCJ6 419 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 IL23AQ9NPF7 189 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 TRMT13Q9NUP7 481 aaKnown RBP10.52□□□□□ -0.73
HLA-B-253ENST00000481849 CXXC1Q9P0U4 656 aaPredicted RBP10.52□□□□□ -0.73
HLA-B-253ENST00000481849 Q9Y3F1 56 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 ZNFX1Q9P2E3 1918 aaKnown RBP10.52□□□□□ -0.73
HLA-B-253ENST00000481849 TCF20Q9UGU0 1960 aaKnown RBP10.52□□□□□ -0.73
HLA-B-253ENST00000481849 FAM208BQ5VWN6 2430 aa10.52□□□□□ -0.73
HLA-B-253ENST00000481849 ZFHX2Q9C0A1 2572 aaPredicted RBP10.51□□□□□ -0.73
HLA-B-253ENST00000481849 GPR37L1O60883 481 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 FGBP02675 491 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 CYP2C9P11712 490 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 CPT1AP50416 773 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 AAMPQ13685 434 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 PPP2R5BQ15173 497 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
HLA-B-253ENST00000481849 IMMTQ16891 758 aaKnown RBP10.51□□□□□ -0.73
HLA-B-253ENST00000481849 FAM47CQ5HY64 1035 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 GPATCH4Q5T3I0 446 aaKnown RBP10.51□□□□□ -0.73
HLA-B-253ENST00000481849 OTOP2Q7RTS6 562 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 IQCA1Q86XH1 822 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 DGKHQ86XP1 1220 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 PPM1EQ8WY54 764 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 SCLYQ96I15 445 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 ZFP42Q96MM3 310 aa10.51□□□□□ -0.73
HLA-B-253ENST00000481849 ZSCAN10Q96SZ4 725 aaPredicted RBP10.51□□□□□ -0.73
HLA-B-253ENST00000481849 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms