RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 MICAL1Q8TDZ2 1067 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 APBA2Q99767 749 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 PTPN18Q99952 460 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 FBLN5Q9UBX5 448 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 DBR1Q9UK59 544 aaKnown RBP3.49□□□□□ -1.85
USH2A-204ENST00000481786 AKT3Q9Y243 479 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 SUGT1Q9Y2Z0 365 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 EMC9Q9Y3B6 208 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 IQGAP2Q13576 1575 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 PCSK5Q92824 1860 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 C9orf84Q5VXU9 1444 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 C2orf71A6NGG8 1288 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 B2RBV5 119 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 STXBP3O00186 592 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 TBC1D8O95759 1140 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 NAT2P11245 290 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 TGFB2P61812 414 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 AMPD2Q01433 879 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 LARP1BQ659C4 914 aaKnown RBP3.48□□□□□ -1.85
USH2A-204ENST00000481786 TTLL7Q6ZT98 887 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 LGI4Q8N135 537 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 BVESQ8NE79 360 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 NLGN2Q8NFZ4 835 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 CHFRQ96EP1 664 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 MRGPRX3Q96LB0 322 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 LGR4Q9BXB1 951 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 IKZF4Q9H2S9 585 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 PDLIM7Q9NR12 457 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 BACE2Q9Y5Z0 518 aa3.48□□□□□ -1.85
USH2A-204ENST00000481786 ATP10AO60312 1499 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 TCOF1Q13428 1488 aaKnown RBP3.47□□□□□ -1.85
USH2A-204ENST00000481786 RAPGEF2Q9Y4G8 1499 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 NPATQ14207 1427 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 A0A1W2PQJ5 194 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 MROH6A6NGR9 719 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 B4GALT3O60512 393 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 DDAH1O94760 285 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 KCNH1O95259 989 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 L1CAMP32004 1257 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 SEPHS1P49903 392 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 CORO7P57737 925 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 CYP4F3Q08477 520 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 FXNQ16595 210 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 MRM1Q6IN84 353 aaKnown RBP3.47□□□□□ -1.85
USH2A-204ENST00000481786 POMZP3Q6PJE2 187 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 JAMLQ86YT9 394 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 TRIM59Q8IWR1 403 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 TXNDC5Q8NBS9 432 aaKnown RBP3.47□□□□□ -1.85
USH2A-204ENST00000481786 DNERQ8NFT8 737 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 COPS5Q92905 334 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 GORASP1Q9BQQ3 440 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 ZNF341Q9BYN7 854 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 UGGT2Q9NYU1 1516 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 BIVM-ERCC5R4GMW8 1640 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 SIGLEC1Q9BZZ2 1709 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 SHANK2Q9UPX8 1470 aa3.47□□□□□ -1.85
USH2A-204ENST00000481786 ALKQ9UM73 1620 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 NOP56O00567 594 aaKnown RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 TBX1O43435 398 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 KLF4O43474 513 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 SUSD5O60279 629 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 PPP1R11O60927 126 aaPredicted RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 GJB6O95452 261 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 ITGAVP06756 1048 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 GLI4P10075 376 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 ZC3H6P61129 1189 aaKnown RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 CACNB2Q08289 660 aaPredicted RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 KIAA2012Q0VF49 1180 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 SCRN1Q12765 414 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 ZNF772Q68DY9 489 aaPredicted RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 GTF2IRD2BQ6EKJ0 949 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 ANKS3Q6ZW76 656 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 GTF2IRD2Q86UP8 949 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 ZNF227Q86WZ6 799 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 CPNE8Q86YQ8 564 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 CRACR2BQ8N4Y2 399 aaPredicted RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 CELF2-AS1Q8N7Q2 184 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 LINC00482Q8N8I6 264 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 IGDCC4Q8TDY8 1250 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 HNRNPLLQ8WVV9 542 aaKnown RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 NAF1Q96HR8 494 aaKnown RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 NKX2-4Q9H2Z4 354 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 DEF6Q9H4E7 631 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 CYP26B1Q9NR63 512 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 SETD1AO15047 1707 aaKnown RBP3.46□□□□□ -1.86
USH2A-204ENST00000481786 ABCA8O94911 1581 aa3.46□□□□□ -1.86
USH2A-204ENST00000481786 SETD1BQ9UPS6 1966 aaKnown RBP3.45□□□□□ -1.86
USH2A-204ENST00000481786 CNTLNQ9NXG0 1405 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 RICTORQ6R327 1708 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 NPHP3-ACAD11A0A0J9YXS1 232 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 LAMTOR5O43504 91 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 SMARCA5O60264 1052 aaPredicted RBP3.45□□□□□ -1.86
USH2A-204ENST00000481786 CAPNS1P04632 268 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 THBDP07204 575 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 C8BP07358 591 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 PLS3P13797 630 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 PAMP19021 973 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 THBS2P35442 1172 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 INHBEP58166 350 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 NANOS3P60323 173 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms