RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MARK1Q9P0L2 795 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 LRRC37A2A6NM11 1700 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 CEMIPQ8WUJ3 1361 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 TRBV23-1A0A0A0MS06 115 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 C9IYK1 514 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 ECEL1O95672 775 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 ZBTB48P10074 688 aaPredicted RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 RLBP1P12271 317 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 RHCEP18577 417 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 RHDQ02161 417 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 ELF2Q15723 593 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 PPP4R3AQ6IN85 833 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 SWSAP1Q6NVH7 229 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 FAM180BQ6P0A1 224 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 C1orf162Q8NEQ5 155 aaPredicted RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 TMEM40Q8WWA1 233 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 CLIP3Q96DZ5 547 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 SMYD2Q9NRG4 433 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 CACNA2D2Q9NY47 1150 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 SAP30BPQ9UHR5 308 aaKnown RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 H2AFYO75367 372 aaKnown RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 HTR3BO95264 441 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 PHKG2P15735 406 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 DSG1Q02413 1049 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 INPP5AQ14642 412 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 KRT72Q14CN4 511 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 CCDC96Q2M329 555 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 CCDC84Q86UT8 332 aaPredicted RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 PPM1KQ8N3J5 372 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 CEP120Q8N960 986 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 ZSCAN1Q8NBB4 408 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 PPHLN1Q8NEY8 458 aaKnown RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 ZSCAN18Q8TBC5 510 aaPredicted RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 BHMTQ93088 406 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 TM9SF2Q99805 663 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 TLR7Q9NYK1 1049 aaKnown RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 H2AFY2Q9P0M6 372 aaPredicted RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 POLHQ9Y253 713 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 HEG1Q9ULI3 1381 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 LCHNA4D1U4 455 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 ITGAVP06756 1048 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 ARAFP10398 606 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 SOX18P35713 384 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 GJA9P57773 515 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 CTBSQ01459 385 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 LAMC2Q13753 1193 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 MINDY4Q4G0A6 757 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 GPR158Q5T848 1215 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 SPOCD1Q6ZMY3 1216 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 DHX32Q7L7V1 743 aaKnown RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 CLRN3Q8NCR9 226 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 ORAI2Q96SN7 254 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 SLC13A1Q9BZW2 595 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 RSPH9Q9H1X1 276 aaPredicted RBP4.04□□□□□ -1.76
SMC6-208ENST00000481708 SPTLC3Q9NUV7 552 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 PGAP2Q9UHJ9 254 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 TRAK1Q9UPV9 953 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 TMX2Q9Y320 296 aa4.04□□□□□ -1.76
SMC6-208ENST00000481708 C2CD2LO14523 706 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 HOXD8P13378 290 aaPredicted RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 VEGFAP15692 232 aaPredicted RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 JAKMIP3Q5VZ66 844 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 DUSP27Q5VZP5 1158 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 LRRC47Q8N1G4 583 aaKnown RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 SLC16A10Q8TF71 515 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 PMEPA1Q969W9 287 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 ACO2Q99798 780 aaKnown RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 MRPL4Q9BYD3 311 aaKnown RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 NLRC4Q9NPP4 1024 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 PCDHGB6Q9Y5F9 930 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 PTPRFP10586 1907 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 TCRBV16S1A1N1A0A5B0 115 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 SLC22A31A6NKX4 558 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 INMTO95050 263 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 EDN3P14138 238 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 NEK4P51957 841 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 LLGL1Q15334 1064 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 ZNF423Q2M1K9 1284 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 PLA2G4EQ3MJ16 856 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 MZT2AQ6P582 158 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 ARHGEF25Q86VW2 580 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 SMAP1Q8IYB5 467 aaPredicted RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 CCDC89Q8N998 374 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 SLC35G2Q8TBE7 412 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 PGBD4Q96DM1 585 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 SERPINB13Q9UIV8 391 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 ZNF214Q9UL59 606 aaPredicted RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 TRAF6Q9Y4K3 522 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 H7C1W4 665 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 M0R3H8 397 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 TRAF5O00463 557 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 CD4P01730 458 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 PYGLP06737 847 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 EPHX1P07099 455 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 MLLT1Q03111 559 aaPredicted RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 DENND5AQ6IQ26 1287 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 MMS22LQ6ZRQ5 1243 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 CATIPQ7Z7H3 387 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 FAM156AQ8NDB6 213 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 SMC1BQ8NDV3 1235 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms