RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 WDR19Q8NEZ3 1342 aa11.05□□□□□ -0.64
SMARCE1-210ENST00000481231 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 PTK7Q13308 1070 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 ADAM15Q13444 863 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 HIC1Q14526 733 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 CHST3Q7LGC8 479 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 ADGRD2Q7Z7M1 963 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 TOP1MTQ969P6 601 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 RMDN1Q96DB5 314 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 C11orf84Q9BUA3 381 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 IFIH1Q9BYX4 1025 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 PNMA2Q9UL42 364 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 MICAL3Q7RTP6 2002 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 CCDC171Q6TFL3 1326 aa11.04□□□□□ -0.64
SMARCE1-210ENST00000481231 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 C5orf67F2Z3F1 127 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 ZNF286BP0CG31 522 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 HDAC1Q13547 482 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 PTPN21Q16825 1174 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 LY6KQ17RY6 165 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 PLEKHG4Q58EX7 1191 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 MFSD6Q6ZSS7 791 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 DGLUCYQ7Z3D6 616 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 TICAM2Q86XR7 235 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 FIBCD1Q8N539 461 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 TMEM105Q8N8V8 129 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 DNERQ8NFT8 737 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 TTC14Q96N46 770 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 CPVLQ9H3G5 476 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 NEDD4P46934 1319 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 CACNA1GO43497 2377 aa11.03□□□□□ -0.64
SMARCE1-210ENST00000481231 NLRC5Q86WI3 1866 aa11.02□□□□□ -0.64
SMARCE1-210ENST00000481231 MMP1P03956 469 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 PCP11498 1178 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 SP100P23497 879 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 ICAM3P32942 547 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 BMPR1AP36894 532 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 THPOP40225 353 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 PSEN2P49810 448 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 ARHGAP1Q07960 439 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 CAMK1Q14012 370 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 MFSD10Q14728 455 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 USH1GQ495M9 461 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 RIPOR3Q96MK2 946 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 PHF7Q9BWX1 381 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 LNPKQ9C0E8 428 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 LMAN2LQ9H0V9 348 aa11.02□□□□□ -0.65
SMARCE1-210ENST00000481231 WDR87Q6ZQQ6 2873 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 RSPH10B2B2RC85 870 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 B4DLN1 442 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 GLP2RO95838 553 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 GH1P01241 217 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 CTSHP09668 335 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 RSPH10BP0C881 870 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 CASTP20810 708 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 NUBP1P53384 320 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 COASYQ13057 564 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 ZBTB33Q86T24 672 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 RBM23Q86U06 439 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 ESR2Q92731 530 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 IL17RAQ96F46 866 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 ZKSCAN3Q9BRR0 538 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 UBA5Q9GZZ9 404 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 RNF41Q9H4P4 317 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 PCDHGC5Q9Y5F6 944 aa11.01□□□□□ -0.65
SMARCE1-210ENST00000481231 RALGAPA2Q2PPJ7 1873 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 RB1P06400 928 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 DNAJB1P25685 340 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 NRIP1P48552 1158 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 RBM10P98175 930 aaKnown RBP11□□□□□ -0.65
SMARCE1-210ENST00000481231 CDC37Q16543 378 aaPredicted RBP11□□□□□ -0.65
SMARCE1-210ENST00000481231 DGKDQ16760 1214 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 SEPT14Q6ZU15 432 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 DGKHQ86XP1 1220 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 DHX37Q8IY37 1157 aaKnown RBP11□□□□□ -0.65
SMARCE1-210ENST00000481231 EFHBQ8N7U6 833 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 PNMA1Q8ND90 353 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 SYTL5Q8TDW5 730 aaPredicted RBP11□□□□□ -0.65
SMARCE1-210ENST00000481231 SEPT8Q92599 483 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 TBC1D5Q92609 795 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 RILPL2Q969X0 211 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 COL20A1Q9P218 1284 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 ADGRA3Q8IWK6 1321 aa11□□□□□ -0.65
SMARCE1-210ENST00000481231 HAS3O00219 553 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 F2P00734 622 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 SDSP20132 328 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 MCTP2Q6DN12 878 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 SERINC5Q86VE9 423 aa10.99□□□□□ -0.65
SMARCE1-210ENST00000481231 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms