RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 LGALS2P05162 132 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 RXRAP19793 462 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 ADCY7P51828 1080 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
CCM2-213ENST00000480658 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 CYFIP1Q7L576 1253 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
CCM2-213ENST00000480658 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 C16orf70Q9BSU1 422 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 RIC8AQ9NPQ8 531 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 CXCL10P02778 98 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 CKBP12277 381 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 GNA11P29992 359 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 HOXC8P31273 242 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 TAF2Q6P1X5 1199 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 RSPH3Q86UC2 560 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 SERINC5Q86VE9 423 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCM2-213ENST00000480658 ATP6V0A1Q93050 837 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 GPR20Q99678 358 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
CCM2-213ENST00000480658 TCEAL9Q9UHQ7 104 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 PCDHA6Q9UN73 950 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 PCDHA8Q9Y5H6 950 aa13.1□□□□□ -0.31
CCM2-213ENST00000480658 SLC26A2P50443 739 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 SETQ01105 290 aaPredicted RBP13.09□□□□□ -0.31
CCM2-213ENST00000480658 SP2Q02086 613 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 IKBKEQ14164 716 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 NIPA1Q7RTP0 329 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 CMTR1Q8N1G2 835 aaKnown RBP13.09□□□□□ -0.31
CCM2-213ENST00000480658 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 SEPT1Q8WYJ6 367 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
CCM2-213ENST00000480658 APBB2Q92870 758 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 JAKMIP1Q96N16 626 aaKnown RBP13.09□□□□□ -0.31
CCM2-213ENST00000480658 SMARCAD1Q9H4L7 1026 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 AZI2Q9H6S1 392 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 C6orf50Q9HD87 102 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 JPH1Q9HDC5 661 aaPredicted RBP13.09□□□□□ -0.31
CCM2-213ENST00000480658 JADE2Q9NQC1 790 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 RTEL1Q9NZ71 1219 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 CXXC1Q9P0U4 656 aaPredicted RBP13.09□□□□□ -0.31
CCM2-213ENST00000480658 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
CCM2-213ENST00000480658 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 NFASCO94856 1347 aa13.09□□□□□ -0.31
CCM2-213ENST00000480658 RSPH10B2B2RC85 870 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 RSPH10BP0C881 870 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 SMIM10L2AP0DMW4 78 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 SMIM10L2BP0DMW5 78 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 SCG2P13521 617 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 RPS6KB1P23443 525 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.32
CCM2-213ENST00000480658 ADCK5Q3MIX3 580 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 CPLX2Q6PUV4 134 aaKnown RBP13.08□□□□□ -0.32
CCM2-213ENST00000480658 TRIM22Q8IYM9 498 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 MYLIPQ8WY64 445 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
CCM2-213ENST00000480658 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
CCM2-213ENST00000480658 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 GTPBP6O43824 516 aaPredicted RBP13.07□□□□□ -0.32
CCM2-213ENST00000480658 LGR5O75473 907 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 KCNA2P16389 499 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 TCF7P36402 384 aaPredicted RBP13.07□□□□□ -0.32
CCM2-213ENST00000480658 ZNF76P36508 570 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 SREBF1P36956 1147 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 THPOP40225 353 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 GRIN2CQ14957 1233 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 CEP55Q53EZ4 464 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 Q6ZUG5 572 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
CCM2-213ENST00000480658 GLG1Q92896 1179 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
CCM2-213ENST00000480658 BRF1Q92994 677 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 MXRA8Q9BRK3 442 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 AGXT2Q9BYV1 514 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
CCM2-213ENST00000480658 V9GY48 417 aaPredicted RBP13.07□□□□□ -0.32
CCM2-213ENST00000480658 LAMA2P24043 3122 aaKnown RBP13.06□□□□□ -0.32
CCM2-213ENST00000480658 RRN3P2A6NIE6 340 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 STXBP3O00186 592 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
CCM2-213ENST00000480658 TLL1O43897 1013 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 AMHP03971 560 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 ITGB5P18084 799 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 PBX2P40425 430 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms