RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 IFNAR2P48551 515 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ARL4CP56559 192 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 YWHAGP61981 247 aaKnown RBP eCLIP6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 DNAJC10Q8IXB1 793 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 EIF1ADQ8N9N8 165 aaKnown RBP6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 GSDMBQ8TAX9 411 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 LRGUKQ96M69 825 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 RABEP2Q9H5N1 569 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ADAMTS1Q9UHI8 967 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ITGB1BP2Q9UKP3 347 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 POLR2MP0CAP2 368 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 FDX1P10109 184 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 PHKG2P15735 406 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 CCND1P24385 295 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 SLFN12LQ6IEE8 588 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 MMGT1Q8N4V1 131 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 PAGE5Q96GU1 130 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM8A1Q9UBU6 413 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ARL2BPQ9Y2Y0 163 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 PCDHA1Q9Y5I3 950 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 MAP3K15Q6ZN16 1313 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 SAMD9LQ8IVG5 1584 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 A0A1B0GTH6 734 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 BAG2O95816 211 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 MMEP08473 750 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ATP1A3P13637 1013 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 PEX19P40855 299 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 TRIM50Q86XT4 487 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 PRPF31Q8WWY3 499 aaKnown RBP6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 MYL10Q9BUA6 226 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 SAMSN1Q9NSI8 373 aaKnown RBP6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 H7C1W4 665 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 MCF2LO15068 1137 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 HAUS5O94927 633 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 LDHAP00338 332 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 GSTA2P09210 222 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 ZSCAN20P17040 1043 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 MAPK4P31152 587 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PTPN12Q05209 780 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 ADRM1Q16186 407 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 NYAP1Q6ZVC0 841 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 RASGRP2Q7LDG7 609 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 RIBC1Q8N443 379 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 KLHDC4Q8TBB5 520 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 ZNF653Q96CK0 615 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 LRRC37BQ96QE4 947 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.63□□□□□ -1.353e-10■■□□□ 12
PRPF4B-205ENST00000480058 LGR6Q9HBX8 967 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 GPCPD1Q9NPB8 672 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 WDR46O15213 610 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SEC31AO94979 1220 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PDCLQ13371 301 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PSMD6Q15008 389 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 CASC4Q6P4E1 433 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 BTNL9Q6UXG8 535 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 NLRP14Q86W24 1093 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SPATA4Q8NEY3 305 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 WWP1Q9H0M0 922 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SLC39A2Q9NP94 309 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 TLK1Q9UKI8 766 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 CAPN11Q9UMQ6 739 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 ZDHHC9Q9Y397 364 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 KIAA0556O60303 1618 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PSMD14O00487 310 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 MED7O43513 233 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 STAM2O75886 525 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM107AO95990 144 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PICALMQ13492 652 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 GIPC2Q8TF65 315 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SYN2Q92777 582 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 CLIC6Q96NY7 704 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 INTUQ9ULD6 942 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 STRIP2Q9ULQ0 834 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SNX12Q9UMY4 172 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 AFG3L2Q9Y4W6 797 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PNPLA6Q8IY17 1366 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SYNMO15061 1565 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 TTC37Q6PGP7 1564 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 KPNA7A9QM74 516 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 EIF3HO15372 352 aaKnown RBP eCLIP6.63□□□□□ -1.355e-7■■□□□ 13.1
PRPF4B-205ENST00000480058 TMEM191BP0C7N4 346 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 CORO7P57737 925 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 OCA2Q04671 838 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 PDIA5Q14554 519 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 EDRF1Q3B7T1 1238 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 RAB44Q7Z6P3 723 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 UNC5CLQ8IV45 518 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 ENAHQ8N8S7 591 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 TMEM35BQ8NCS4 154 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 RFFLQ8WZ73 363 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 TRIM15Q9C019 465 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 KLC4Q9NSK0 619 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 UBE4BO95155 1302 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 MED14O60244 1454 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 CFAP69A5D8W1 941 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SPECC1L-ADORA2AF8WAN1 911 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 AP3B1O00203 1094 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 ELF1P32519 619 aa6.63□□□□□ -1.35
PRPF4B-205ENST00000480058 SERPINB6P35237 376 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms