RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 MRPL40Q9NQ50 206 aaKnown RBP11.84□□□□□ -0.51
EWSR1-216ENST00000479135 OLFML3Q9NRN5 406 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 ENC1O14682 589 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 SNPHO15079 494 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 ADAMTS2O95450 1211 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 RALGDSQ12967 914 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 SFMBT2Q5VUG0 894 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 PCGF5Q86SE9 256 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 CDR2LQ86X02 465 aaPredicted RBP11.84□□□□□ -0.51
EWSR1-216ENST00000479135 ZC3H7BQ9UGR2 993 aaKnown RBP11.84□□□□□ -0.51
EWSR1-216ENST00000479135 ARHGAP10A1A4S6 786 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 LRPAP1P30533 357 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 EIF2S3LQ2VIR3 472 aaKnown RBP11.84□□□□□ -0.51
EWSR1-216ENST00000479135 NUP93Q8N1F7 819 aa11.84□□□□□ -0.51
EWSR1-216ENST00000479135 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
EWSR1-216ENST00000479135 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 XPO1O14980 1071 aaKnown RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 PEX1O43933 1283 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 PMLP29590 882 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 CTTNQ14247 550 aaKnown RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 C16orf72Q14CZ0 275 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 CCHCR1Q8TD31 782 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 ARL8AQ96BM9 186 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 DISC1Q9NRI5 854 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 EXOC3O60645 756 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 NR5A1Q13285 461 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 TBC1D9Q6ZT07 1266 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 SERPINI1Q99574 410 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 CCDC162PA2VCL2 907 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 RASGRF2O14827 1237 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 SERPINB2P05120 415 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 DYNC1I2Q13409 638 aaKnown RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 DCAF4L1Q3SXM0 396 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 ICA1LQ8NDH6 482 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 TIMM8BQ9Y5J9 83 aaPredicted RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 POLR2DO15514 142 aaKnown RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 PDHA2P29803 388 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 AARSP49588 968 aaKnown RBP eCLIP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 TNFAIP2Q03169 654 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 C2orf54Q08AI8 447 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 DNALI1O14645 258 aaPredicted RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 KIF11P52732 1056 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 GABPB1Q06547 395 aaPredicted RBP11.83□□□□□ -0.52
EWSR1-216ENST00000479135 OR8H2Q8N162 312 aa11.83□□□□□ -0.52
EWSR1-216ENST00000479135 BIRC5O15392 142 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 DEAF1O75398 565 aaPredicted RBP11.82□□□□□ -0.52
EWSR1-216ENST00000479135 TOMM70O94826 608 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 SERPINB1P30740 379 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 IPPQ9Y573 584 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 A6NJR5 290 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 CXCR5P32302 372 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 FAF2Q96CS3 445 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 FAM193BQ96PV7 902 aaPredicted RBP11.82□□□□□ -0.52
EWSR1-216ENST00000479135 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 PIPSLA2A3N6 862 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 ARHGEF35A5YM69 484 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 M0QZ92 97 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 SCG2P13521 617 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 NFIL3Q16649 462 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 FAM102BQ5T8I3 360 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 RINT1Q6NUQ1 792 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 KIAA0408Q6ZU52 694 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 TESK2Q96S53 571 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 RRAGDQ9NQL2 400 aaPredicted RBP11.82□□□□□ -0.52
EWSR1-216ENST00000479135 PIK3AP1Q6ZUJ8 805 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 TTC17Q96AE7 1141 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 TROQ12816 1431 aaPredicted RBP11.82□□□□□ -0.52
EWSR1-216ENST00000479135 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
EWSR1-216ENST00000479135 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 SYCE1Q8N0S2 351 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 GYG2O15488 501 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 DLATP10515 647 aaKnown RBP11.82□□□□□ -0.52
EWSR1-216ENST00000479135 FEN1P39748 380 aaKnown RBP11.82□□□□□ -0.52
EWSR1-216ENST00000479135 GABBR1Q9UBS5 961 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 GGT7Q9UJ14 662 aa11.82□□□□□ -0.52
EWSR1-216ENST00000479135 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 UBTFL6P0CB48 400 aaPredicted RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 KRT76Q01546 638 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 C11orf96Q7Z7L8 435 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 TEX19Q8NA77 164 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 POLIQ9UNA4 740 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 KDRP35968 1356 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 HSPA4LO95757 839 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 YWHABP31946 246 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms