RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 ATP9AO75110 1047 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 CTDNEP1O95476 244 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 TIMP1P01033 207 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 KCNA2P16389 499 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 NBPF20Q3BBV1 942 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 CEP55Q53EZ4 464 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 CCDC148Q8NFR7 591 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 CYP2W1Q8TAV3 490 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 BICD2Q8TD16 824 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 SPATA33Q96N06 139 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 MXRA8Q9BRK3 442 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 C16orf70Q9BSU1 422 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 MLXIPQ9HAP2 919 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 TMEM260Q9NX78 707 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 ALPK3Q96L96 1907 aa11.38□□□□□ -0.59
SCAMP3-206ENST00000478737 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 M0R2N6 131 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 TLR3O15455 904 aaKnown RBP11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 JAK2O60674 1132 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 DTNBO60941 627 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 F2P00734 622 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 SUPT20HL2P0C7V6 817 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 CIITAP33076 1130 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 ARHGAP4P98171 946 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 MTMR1Q13613 665 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 NPY5RQ15761 445 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 GALNT17Q6IS24 598 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 NIPA1Q7RTP0 329 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 REXO1Q8N1G1 1221 aaKnown RBP11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 NSUN7Q8NE18 718 aaKnown RBP11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 BADQ92934 168 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 TMX3Q96JJ7 454 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 GPR20Q99678 358 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 LBHD1Q9BQE6 289 aaPredicted RBP11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 TRPV6Q9H1D0 765 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 KCNH7Q9NS40 1196 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 VPS54Q9P1Q0 977 aa11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 ORC3Q9UBD5 711 aaPredicted RBP11.37□□□□□ -0.59
SCAMP3-206ENST00000478737 EDIL3O43854 480 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 B4GALT4O60513 344 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 FDPSP14324 419 aaKnown RBP11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 RAG1P15918 1043 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 USP11P51784 963 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 FOSBP53539 338 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 JAKMIP3Q5VZ66 844 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 MFSD5Q6N075 450 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 CYFIP1Q7L576 1253 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 DAGLBQ8NCG7 672 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 GBP4Q96PP9 640 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 CTAGE1Q96RT6 745 aa11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 NOC4LQ9BVI4 516 aaKnown RBP11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 UBE2OQ9C0C9 1292 aaKnown RBP11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
SCAMP3-206ENST00000478737 IGLV3-22A0A075B6J6 115 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 FAM86B1E9PN63 330 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 FAM86B2P0C5J1 330 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 ARP10275 920 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 HOXC8P31273 242 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 DDIT3P35638 169 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 PSEN2P49810 448 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 NLRP5P59047 1200 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 GSE1Q14687 1217 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 TDHQ8IZJ6 230 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 WASF1Q92558 559 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 AIFM3Q96NN9 605 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 LLPHQ9BRT6 129 aaKnown RBP11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 KATNAL1Q9BW62 490 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 AGO4Q9HCK5 861 aaKnown RBP11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 PCDH10Q9P2E7 1040 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 GTF2IRD1Q9UHL9 959 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 PCDHA4Q9UN74 947 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 NFASCO94856 1347 aa11.35□□□□□ -0.59
SCAMP3-206ENST00000478737 SCN10AQ9Y5Y9 1956 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 GSTTP1A0A1W2PQM5 241 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 H3BRB1 525 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 NOP56O00567 594 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 DHX15O43143 795 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 LGALS2P05162 132 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 FXR1P51114 621 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 HMGN5P82970 282 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 MFSD10Q14728 455 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 KIAA0753Q2KHM9 967 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 BLIDQ8IZY5 108 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 SEPT1Q8WYJ6 367 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 ALG1Q9BT22 464 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 TUT1Q9H6E5 874 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 TELO2Q9Y4R8 837 aa11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 MYH9P35579 1960 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-206ENST00000478737 CYP3A7-CYP3A51PA0A087WV96 503 aa11.33□□□□□ -0.6
SCAMP3-206ENST00000478737 PITPNM1O00562 1244 aa11.33□□□□□ -0.6
SCAMP3-206ENST00000478737 SORBS3O60504 671 aa11.33□□□□□ -0.6
SCAMP3-206ENST00000478737 ATG7O95352 703 aa11.33□□□□□ -0.6
SCAMP3-206ENST00000478737 ZNF286BP0CG31 522 aa11.33□□□□□ -0.6
SCAMP3-206ENST00000478737 XBP1P17861 261 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms