RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 UIMC1Q96RL1 719 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 ZNF577Q9BSK1 485 aa17.35■□□□□ 0.37
SEC13-215ENST00000477547 AGO4Q9HCK5 861 aaKnown RBP17.35■□□□□ 0.37
SEC13-215ENST00000477547 DDX20Q9UHI6 824 aaKnown RBP17.35■□□□□ 0.37
SEC13-215ENST00000477547 NKRFO15226 690 aaKnown RBP eCLIP17.34■□□□□ 0.37
SEC13-215ENST00000477547 MSH4O15457 936 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 SORBS3O60504 671 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 GGPS1O95749 300 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 TGFB3P10600 412 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 RARBP10826 455 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 KCNA2P16389 499 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 PTGS1P23219 599 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 CALCRLQ16602 461 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 FOXD4L6Q3SYB3 417 aaPredicted RBP17.34■□□□□ 0.37
SEC13-215ENST00000477547 DUSP28Q4G0W2 176 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 TMEM63BQ5T3F8 832 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 FOXD4L3Q6VB84 417 aaPredicted RBP17.34■□□□□ 0.37
SEC13-215ENST00000477547 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 COPS5Q92905 334 aa17.34■□□□□ 0.37
SEC13-215ENST00000477547 FTOQ9C0B1 505 aaKnown RBP eCLIP17.34■□□□□ 0.37
SEC13-215ENST00000477547 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.34■□□□□ 0.37
SEC13-215ENST00000477547 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
SEC13-215ENST00000477547 IPO5O00410 1097 aaKnown RBP17.33■□□□□ 0.36
SEC13-215ENST00000477547 MAFGO15525 162 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 MSCO60682 206 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 SGPL1O95470 568 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 GH1P01241 217 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 ITGB3BPQ13352 177 aaPredicted RBP17.33■□□□□ 0.36
SEC13-215ENST00000477547 NEDD9Q14511 834 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 OR6J1Q8NGC5 347 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 SDF4Q9BRK5 362 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 KCNMB3Q9NPA1 279 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 PAK6Q9NQU5 681 aaPredicted RBP17.33■□□□□ 0.36
SEC13-215ENST00000477547 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 TCEAL9Q9UHQ7 104 aa17.33■□□□□ 0.36
SEC13-215ENST00000477547 NFASCO94856 1347 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 ALPK3Q96L96 1907 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 DDX39AO00148 427 aaKnown RBP17.32■□□□□ 0.36
SEC13-215ENST00000477547 TBX3O15119 743 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 MARCH6O60337 910 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 ATP9AO75110 1047 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 DUSP11O75319 330 aaKnown RBP17.32■□□□□ 0.36
SEC13-215ENST00000477547 OR52Z1P0C646 297 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 SP2Q02086 613 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 ARHGAP1Q07960 439 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 Q7L0L9 218 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
SEC13-215ENST00000477547 SLC5A5Q92911 643 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 GJA10Q969M2 543 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
SEC13-215ENST00000477547 USP28Q96RU2 1077 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 TMEM60Q9H2L4 133 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 JPH1Q9HDC5 661 aaPredicted RBP17.32■□□□□ 0.36
SEC13-215ENST00000477547 XPNPEP3Q9NQH7 507 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 GNEQ9Y223 722 aaKnown RBP17.32■□□□□ 0.36
SEC13-215ENST00000477547 ATP6V1DQ9Y5K8 247 aa17.32■□□□□ 0.36
SEC13-215ENST00000477547 GAS7O60861 476 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 SP4Q02446 784 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 SF3A1Q15459 793 aaKnown RBP17.31■□□□□ 0.36
SEC13-215ENST00000477547 CELF3Q5SZQ8 465 aaKnown RBP17.31■□□□□ 0.36
SEC13-215ENST00000477547 METTL7BQ6UX53 244 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
SEC13-215ENST00000477547 SLFN12Q8IYM2 578 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 TEKT3Q9BXF9 490 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 AP5M1Q9H0R1 490 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 LOXHD1Q8IVV2 1947 aa17.31■□□□□ 0.36
SEC13-215ENST00000477547 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
SEC13-215ENST00000477547 BMP15O95972 392 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 TFRCP02786 760 aaKnown RBP17.3■□□□□ 0.36
SEC13-215ENST00000477547 ATP2C1P98194 919 aaPredicted RBP17.3■□□□□ 0.36
SEC13-215ENST00000477547 CEBPZQ03701 1054 aaKnown RBP17.3■□□□□ 0.36
SEC13-215ENST00000477547 PTGDRQ13258 359 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 CYFIP1Q7L576 1253 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 DEFB123Q8N688 67 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 HAS1Q92839 578 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 FAM20AQ96MK3 541 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 RIT2Q99578 217 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
SEC13-215ENST00000477547 MLXIPQ9HAP2 919 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 TBC1D22BQ9NU19 505 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 CLIC4Q9Y696 253 aa17.3■□□□□ 0.36
SEC13-215ENST00000477547 LAD1O00515 517 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 NOP56O00567 594 aaKnown RBP17.29■□□□□ 0.36
SEC13-215ENST00000477547 DYNC1LI2O43237 492 aaPredicted RBP17.29■□□□□ 0.36
SEC13-215ENST00000477547 CHMP2AO43633 222 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 PGK1P00558 417 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 C6orf222P0C671 652 aaPredicted RBP17.29■□□□□ 0.36
SEC13-215ENST00000477547 NCLP19338 710 aaKnown RBP17.29■□□□□ 0.36
SEC13-215ENST00000477547 DNM1Q05193 864 aaKnown RBP17.29■□□□□ 0.36
SEC13-215ENST00000477547 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 EMID1Q96A84 441 aaPredicted RBP17.29■□□□□ 0.36
SEC13-215ENST00000477547 PAWRQ96IZ0 340 aaKnown RBP17.29■□□□□ 0.36
SEC13-215ENST00000477547 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 MTMR9Q96QG7 549 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms