RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 HSP90AA2PQ14568 343 aaPredicted RBP6.49□□□□□ -1.37
UBR3-209ENST00000477461 DDR2Q16832 855 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 EMC4Q5J8M3 183 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 GLB1LQ6UWU2 654 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 CHST13Q8NET6 341 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 BORCS6Q96GS4 357 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 TMEM168Q9H0V1 697 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 EPN3Q9H201 632 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 TMPRSS5Q9H3S3 457 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 GPR27Q9NS67 375 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 ASH2LQ9UBL3 628 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 CNOT11Q9UKZ1 510 aaKnown RBP6.49□□□□□ -1.37
UBR3-209ENST00000477461 KRIT1O00522 736 aa6.48□□□□□ -1.37
UBR3-209ENST00000477461 B4GALT4O60513 344 aa6.48□□□□□ -1.37
UBR3-209ENST00000477461 RBM25P49756 843 aaKnown RBP6.48□□□□□ -1.37
UBR3-209ENST00000477461 TRMT10BQ6PF06 316 aaKnown RBP6.48□□□□□ -1.37
UBR3-209ENST00000477461 ZCCHC14Q8WYQ9 949 aaKnown RBP6.48□□□□□ -1.37
UBR3-209ENST00000477461 SLC6A20Q9NP91 592 aa6.48□□□□□ -1.37
UBR3-209ENST00000477461 E9PSI1 815 aa6.47□□□□□ -1.37
UBR3-209ENST00000477461 KLF4O43474 513 aa6.47□□□□□ -1.37
UBR3-209ENST00000477461 NTRK3Q16288 839 aa6.47□□□□□ -1.37
UBR3-209ENST00000477461 YOD1Q5VVQ6 348 aaPredicted RBP6.47□□□□□ -1.37
UBR3-209ENST00000477461 YTHDC1Q96MU7 727 aaKnown RBP6.47□□□□□ -1.37
UBR3-209ENST00000477461 PTPN18Q99952 460 aa6.47□□□□□ -1.37
UBR3-209ENST00000477461 AARSD1Q9BTE6 412 aaKnown RBP6.47□□□□□ -1.37
UBR3-209ENST00000477461 JADE2Q9NQC1 790 aa6.47□□□□□ -1.37
UBR3-209ENST00000477461 IGSF5Q9NSI5 407 aa6.47□□□□□ -1.37
UBR3-209ENST00000477461 PPP4R1LQ9P1A2 415 aa6.47□□□□□ -1.37
UBR3-209ENST00000477461 NACADO15069 1562 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 MAFKO60675 156 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 CKMP06732 381 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 GLRBP48167 497 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 TUSC3Q13454 348 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 NSMFQ6X4W1 530 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 KBTBD2Q8IY47 623 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 IGDCC4Q8TDY8 1250 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 OSBP2Q969R2 916 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 SAMD11Q96NU1 681 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 TMEM209Q96SK2 561 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 SSBP3Q9BWW4 388 aaPredicted RBP6.46□□□□□ -1.38
UBR3-209ENST00000477461 ARHGEF4Q9NR80 690 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 FTSJ1Q9UET6 329 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 MYRFQ9Y2G1 1151 aa6.46□□□□□ -1.38
UBR3-209ENST00000477461 DCAF1Q9Y4B6 1507 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 NPEPPSL1A6NEC2 478 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 NKRFO15226 690 aaKnown RBP eCLIP6.45□□□□□ -1.38
UBR3-209ENST00000477461 LAMTOR5O43504 91 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 PABPC1P11940 636 aaKnown RBP6.45□□□□□ -1.38
UBR3-209ENST00000477461 ZNF20P17024 532 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 CPZQ66K79 652 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 LBX2Q6XYB7 198 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 OTOP3Q7RTS5 596 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 PROSER1Q86XN7 944 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 PHOSPHO1Q8TCT1 267 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 DCAF4Q8WV16 495 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 MBD6Q96DN6 1003 aa6.45□□□□□ -1.38
UBR3-209ENST00000477461 RB1CC1Q8TDY2 1594 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 GNAT1P11488 350 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 ICAM4Q14773 271 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 VASNQ6EMK4 673 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 NUDT10Q8NFP7 164 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 NUDT11Q96G61 164 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 TELO2Q9Y4R8 837 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 MYO15BQ96JP2 1530 aa6.44□□□□□ -1.38
UBR3-209ENST00000477461 IQCA1LA6NCM1 817 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 CYP7B1O75881 506 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 GRK2P25098 689 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 GRK3P35626 688 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 PPP2CBP62714 309 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 PPP2CAP67775 309 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 SPIRE1Q08AE8 756 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 IFRD2Q12894 506 aaPredicted RBP6.43□□□□□ -1.38
UBR3-209ENST00000477461 NFATC3Q12968 1075 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 PAN2Q504Q3 1202 aaKnown RBP6.43□□□□□ -1.38
UBR3-209ENST00000477461 RSPO2Q6UXX9 243 aaPredicted RBP6.43□□□□□ -1.38
UBR3-209ENST00000477461 SLC43A3Q8NBI5 491 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 SGSM3Q96HU1 749 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 KRTAP3-1Q9BYR8 98 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 IPPKQ9H8X2 491 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 PPP1R1BQ9UD71 204 aaPredicted RBP6.43□□□□□ -1.38
UBR3-209ENST00000477461 TRAF6Q9Y4K3 522 aa6.43□□□□□ -1.38
UBR3-209ENST00000477461 ASXL2Q76L83 1435 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 TRAV20A0A0B4J274 112 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 CCDC85CA6NKD9 419 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 FBXO21O94952 628 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 FGFR1P11362 822 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 FAHP16930 419 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 GPR85P60893 370 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 RAB33AQ14088 237 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 SKIDA1Q1XH10 827 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 KIZQ2M2Z5 673 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 ARHGEF18Q6ZSZ5 1173 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 STPG3Q8N7X2 389 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 GMLQ99445 158 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 TRIM55Q9BYV6 548 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 CD244Q9BZW8 370 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 BARX1Q9HBU1 254 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms