RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 EIF4A3P38919 411 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 GYG1P46976 350 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 GKAP1Q5VSY0 366 aaPredicted RBP16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 TYW1BQ6NUM6 668 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 CATIPQ7Z7H3 387 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 TATDN2Q93075 761 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 SCLT1Q96NL6 688 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 PPANQ9NQ55 473 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 RBAK-RBAKDNI3L0D1 243 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 IFT81Q8WYA0 676 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 FAM212AQ96EL1 285 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 HINFPQ9BQA5 517 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 ISCUQ9H1K1 167 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 CNOT10Q9H9A5 744 aaKnown RBP16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 ANAPC4Q9UJX5 808 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 LEMD3Q9Y2U8 911 aa16.78■□□□□ 0.28
CLSTN1-205ENST00000477264 CXCR5P32302 372 aa16.77■□□□□ 0.28
CLSTN1-205ENST00000477264 PPP2R2AP63151 447 aa16.77■□□□□ 0.28
CLSTN1-205ENST00000477264 RIPK1Q13546 671 aa16.77■□□□□ 0.28
CLSTN1-205ENST00000477264 CCSER1Q9C0I3 900 aa16.77■□□□□ 0.28
CLSTN1-205ENST00000477264 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
CLSTN1-205ENST00000477264 KBTBD4Q9NVX7 518 aa16.77■□□□□ 0.28
CLSTN1-205ENST00000477264 ATAD5Q96QE3 1844 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 KIF13BQ9NQT8 1826 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 WTIPA6NIX2 430 aaPredicted RBP16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 DNM1LO00429 736 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 CALML3P27482 149 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 KLK7P49862 253 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 GUCY2FP51841 1108 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 ICA1Q05084 483 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 IL17AQ16552 155 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 TMC4Q7Z404 712 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 RASSF8Q8NHQ8 419 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 FAM84BQ96KN1 310 aaPredicted RBP16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 ARMT1Q9H993 441 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 EHD2Q9NZN4 543 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 SIK3Q9Y2K2 1263 aa16.77■□□□□ 0.27
CLSTN1-205ENST00000477264 CNTNAP5Q8WYK1 1306 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 FGFR1OPO95684 399 aaKnown RBP16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 PCP11498 1178 aaKnown RBP16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 NPR1P16066 1061 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 HPDP32754 393 aaPredicted RBP16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 CCT6BQ92526 530 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 HVCN1Q96D96 273 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 INPP4AQ96PE3 977 aaPredicted RBP16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 SMARCAL1Q9NZC9 954 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
CLSTN1-205ENST00000477264 NCK2O43639 380 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 PRDM1O75626 825 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 PLEKP08567 350 aaPredicted RBP16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 PAX7P23759 505 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 MCM7P33993 719 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 MRPS25P82663 173 aaKnown RBP16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 TMED8Q6PL24 325 aaPredicted RBP16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 CENPTQ96BT3 561 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 EBF2Q9HAK2 575 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 V9GY48 417 aaPredicted RBP16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 MYH4Q9Y623 1939 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 MYH7BA7E2Y1 1941 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 CFAP73A6NFT4 308 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 ORC4O43929 436 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 ATP6V1G2O95670 118 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 NAALADL2Q58DX5 795 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 SPDYCQ5MJ68 293 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 PIK3AP1Q6ZUJ8 805 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 CUL5Q93034 780 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 PSMB7Q99436 277 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 LAMB1P07942 1786 aa16.75■□□□□ 0.27
CLSTN1-205ENST00000477264 H0YGN5 161 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 LAD1O00515 517 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 HSD17B3P37058 310 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 GRIK3Q13003 919 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 NAA25Q14CX7 972 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 MAN2A1Q16706 1144 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 ASTE1Q2TB18 679 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 VWA3BQ502W6 1294 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 C4orf32Q8N8J7 132 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 SYN2Q92777 582 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 MTMR8Q96EF0 704 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 KRT12Q99456 494 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 NFS1Q9Y697 457 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 BHMG1C9JSJ3 638 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 PPEF1O14829 653 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 NLRP5P59047 1200 aa16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 ELF3P78545 371 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 BYSLQ13895 437 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-205ENST00000477264 ANKS4BQ8N8V4 417 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms