RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 C11orf57Q6ZUT1 292 aaPredicted RBP32.37■■■□□ 2.77
VEGFA-211ENST00000476772 UNC45AQ9H3U1 944 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 ADD3Q9UEY8 706 aaKnown RBP32.37■■■□□ 2.77
VEGFA-211ENST00000476772 MAN1B1Q9UKM7 699 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 POTEB3A0JP26 581 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 SMC2O95347 1197 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 PGK2P07205 417 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 FCER1AP12319 257 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 FSTL1Q12841 308 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 CUL4BQ13620 913 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 DPCR1Q3MIW9 517 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 POTEBQ6S5H4 581 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 KCNK18Q7Z418 384 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 NLRX1Q86UT6 975 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 CCDC102AQ96A19 550 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 GPRASP2Q96D09 838 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 NT5C3AQ9H0P0 336 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 STK24Q9Y6E0 443 aa32.36■■■□□ 2.77
VEGFA-211ENST00000476772 DHX15O43143 795 aaKnown RBP32.35■■■□□ 2.77
VEGFA-211ENST00000476772 STAM2O75886 525 aa32.35■■■□□ 2.77
VEGFA-211ENST00000476772 RGS20O76081 388 aa32.35■■■□□ 2.77
VEGFA-211ENST00000476772 B3GNT9Q6UX72 402 aa32.35■■■□□ 2.77
VEGFA-211ENST00000476772 DNAJC25-GNG10A0A024R161 153 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 DDX39AO00148 427 aaKnown RBP32.34■■■□□ 2.77
VEGFA-211ENST00000476772 DEKP35659 375 aaKnown RBP32.34■■■□□ 2.77
VEGFA-211ENST00000476772 CATSPER3Q86XQ3 398 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 FAM200AQ8TCP9 573 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 ZCCHC17Q9NP64 241 aaKnown RBP32.34■■■□□ 2.77
VEGFA-211ENST00000476772 KIAA1217Q5T5P2 1943 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 ZNFX1Q9P2E3 1918 aaKnown RBP32.34■■■□□ 2.77
VEGFA-211ENST00000476772 RPA1P27694 616 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 SEMA3FQ13275 785 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 STXBP2Q15833 593 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 LARP4BQ92615 738 aaKnown RBP32.34■■■□□ 2.77
VEGFA-211ENST00000476772 RAD54LQ92698 747 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 EIF2AK1Q9BQI3 630 aaKnown RBP32.34■■■□□ 2.77
VEGFA-211ENST00000476772 KIAA1024Q9UPX6 916 aa32.34■■■□□ 2.77
VEGFA-211ENST00000476772 PLXNB2O15031 1838 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 LRRC37A2A6NM11 1700 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 ATP9AO75110 1047 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 SPATA31C1P0DKV0 1188 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 XRCC6P12956 609 aaKnown RBP eCLIP32.33■■■□□ 2.772e-10■□□□□ 8.4
VEGFA-211ENST00000476772 EDNRBP24530 442 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 FAM110CQ1W6H9 321 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 HHIPL1Q96JK4 782 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 FGD4Q96M96 766 aa32.33■■■□□ 2.77
VEGFA-211ENST00000476772 MCM6Q14566 821 aa32.32■■■□□ 2.76
VEGFA-211ENST00000476772 IFNL1Q8IU54 200 aa32.32■■■□□ 2.76
VEGFA-211ENST00000476772 CBX8Q9HC52 389 aa32.32■■■□□ 2.76
VEGFA-211ENST00000476772 TBC1D22BQ9NU19 505 aa32.32■■■□□ 2.76
VEGFA-211ENST00000476772 ADGRA2Q96PE1 1338 aa32.32■■■□□ 2.76
VEGFA-211ENST00000476772 POTEFA5A3E0 1075 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 MAFGO15525 162 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 ZNF165P49910 485 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 INHBEP58166 350 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 CYP4A11Q02928 519 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 DHX8Q14562 1220 aaKnown RBP32.31■■■□□ 2.76
VEGFA-211ENST00000476772 TAF1CQ15572 869 aaPredicted RBP32.31■■■□□ 2.76
VEGFA-211ENST00000476772 POTEGQ6S5H5 508 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 POLR3CQ9BUI4 534 aaPredicted RBP32.31■■■□□ 2.76
VEGFA-211ENST00000476772 EIF3JO75822 258 aaKnown RBP32.31■■■□□ 2.76
VEGFA-211ENST00000476772 CAVIN2O95810 425 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 BMP6P22004 513 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 MORC3Q14149 939 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 GNPTABQ3T906 1256 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 SV2BQ7L1I2 683 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 TRIML1Q8N9V2 468 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 GSDMAQ96QA5 445 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 RGL1Q9NZL6 768 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 CPA4Q9UI42 421 aa32.31■■■□□ 2.76
VEGFA-211ENST00000476772 MYL1P05976 194 aa32.3■■■□□ 2.76
VEGFA-211ENST00000476772 PDE4DQ08499 809 aa32.3■■■□□ 2.76
VEGFA-211ENST00000476772 E9PMD0 336 aa32.29■■■□□ 2.76
VEGFA-211ENST00000476772 EPHA7Q15375 998 aa32.29■■■□□ 2.76
VEGFA-211ENST00000476772 DYDC2Q96IM9 177 aa32.29■■■□□ 2.76
VEGFA-211ENST00000476772 CDHR1Q96JP9 859 aa32.29■■■□□ 2.76
VEGFA-211ENST00000476772 HSD17B14Q9BPX1 270 aa32.29■■■□□ 2.76
VEGFA-211ENST00000476772 AMPD3Q01432 767 aa32.28■■■□□ 2.76
VEGFA-211ENST00000476772 SREBF2Q12772 1141 aa32.28■■■□□ 2.76
VEGFA-211ENST00000476772 PAXIP1Q6ZW49 1069 aaPredicted RBP32.28■■■□□ 2.76
VEGFA-211ENST00000476772 TRIM9Q9C026 710 aa32.28■■■□□ 2.76
VEGFA-211ENST00000476772 TUFT1Q9NNX1 390 aa32.28■■■□□ 2.76
VEGFA-211ENST00000476772 SPATA31C2B4DYI2 1134 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 RPN1P04843 607 aaKnown RBP32.27■■■□□ 2.76
VEGFA-211ENST00000476772 KCNA2P16389 499 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 GRM1Q13255 1194 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 CTTNQ14247 550 aaKnown RBP32.27■■■□□ 2.76
VEGFA-211ENST00000476772 MIER3Q7Z3K6 550 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 LUZP1Q86V48 1076 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 ZIC5Q96T25 663 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 C7orf25Q9BPX7 421 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 B4DLN1 442 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 SLITRK3O94933 977 aa32.27■■■□□ 2.76
VEGFA-211ENST00000476772 NAT10Q9H0A0 1025 aaKnown RBP32.27■■■□□ 2.76
VEGFA-211ENST00000476772 ADORA2AP29274 412 aa32.26■■■□□ 2.75
VEGFA-211ENST00000476772 CYP4F22Q6NT55 531 aa32.26■■■□□ 2.75
VEGFA-211ENST00000476772 GPR142Q7Z601 462 aa32.26■■■□□ 2.75
VEGFA-211ENST00000476772 MPHOSPH6Q99547 160 aaKnown RBP32.26■■■□□ 2.75
VEGFA-211ENST00000476772 IVNS1ABPQ9Y6Y0 642 aa32.26■■■□□ 2.75
VEGFA-211ENST00000476772 MYMKA6NI61 221 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms