RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ZFATQ9P243 1243 aa11.57□□□□□ -0.56
ABCF1-205ENST00000475993 AGAP1Q9UPQ3 857 aa11.57□□□□□ -0.56
ABCF1-205ENST00000475993 FER1L4A9Z1Z3 1794 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 CYP27B1O15528 508 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 MTMR3Q13615 1198 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 ALX1Q15699 326 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 IL17AQ16552 155 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 INF2Q27J81 1249 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 CSGALNACT2Q8N6G5 542 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 PHC3Q8NDX5 983 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 TNFRSF25Q93038 417 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 TLCD1Q96CP7 247 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 RNF26Q9BY78 433 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-205ENST00000475993 MYH6P13533 1939 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 BUB1O43683 1085 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 TRPM8Q7Z2W7 1104 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 FANCBQ8NB91 859 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 GIMAP8Q8ND71 665 aaPredicted RBP11.56□□□□□ -0.56
ABCF1-205ENST00000475993 PLBD2Q8NHP8 589 aa11.56□□□□□ -0.56
ABCF1-205ENST00000475993 CNOT6LQ96LI5 555 aaKnown RBP11.56□□□□□ -0.56
ABCF1-205ENST00000475993 KLRC4O43908 158 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 CTNND1O60716 968 aaKnown RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 RHOBTB3O94955 611 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 XBP1P17861 261 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 ALDH5A1P51649 535 aaPredicted RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 KCNJ2P63252 427 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 RASSF7Q02833 373 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 MYBPC3Q14896 1274 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 PKN1Q16512 942 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 IFI16Q16666 785 aaKnown RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 ANKRD20A2Q5SQ80 823 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 ANKRD20A1Q5TYW2 823 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 ANKRD20A3Q5VUR7 823 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 NUGGCQ68CJ6 796 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 C17orf50Q8WW18 174 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 DHTKD1Q96HY7 919 aaPredicted RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 NOC4LQ9BVI4 516 aaKnown RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 UBE2OQ9C0C9 1292 aaKnown RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 FBXL5Q9UKA1 691 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 CHD4Q14839 1912 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 A0A0G2JS52 829 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 EPHB6O15197 1021 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 SFSWAPQ12872 951 aaKnown RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 MEI1Q5TIA1 1274 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 SDCCAG8Q86SQ7 713 aaPredicted RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 DZIP3Q86Y13 1208 aaKnown RBP11.55□□□□□ -0.56
ABCF1-205ENST00000475993 FAM114A1Q8IWE2 563 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 MDM1Q8TC05 714 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 ANKRD27Q96NW4 1050 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 NEUROG2Q9H2A3 272 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 SIK3Q9Y2K2 1263 aa11.55□□□□□ -0.56
ABCF1-205ENST00000475993 RBAK-RBAKDNI3L0D1 243 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 STXBP3O00186 592 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 ZPR1O75312 459 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 PALMO75781 387 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 SLC1A4P43007 532 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 NCALDP61601 193 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 WTAPQ15007 396 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 UBE3CQ15386 1083 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 FAM133BQ5BKY9 247 aaKnown RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 CACNA2D4Q7Z3S7 1137 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 ERICH1Q86X53 443 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 TEX9Q8N6V9 391 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 TEKT4Q8WW24 435 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 TIAM2Q8IVF5 1701 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 SART1O43290 800 aaKnown RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 RARAP10276 462 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 EIF4BP23588 611 aaKnown RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 MTIF2P46199 727 aaKnown RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 MXRA7P84157 204 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 GFPT1Q06210 699 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 SEPT2Q15019 361 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 GALNT17Q6IS24 598 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 KLHL7Q8IXQ5 586 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 UBLCP1Q8WVY7 318 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 ZNF496Q96IT1 587 aaPredicted RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 OSBPL1AQ9BXW6 950 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 KRT23Q9C075 422 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 SPATA31A3Q5VYP0 1347 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 PHRF1Q9P1Y6 1649 aaKnown RBP11.54□□□□□ -0.56
ABCF1-205ENST00000475993 AKAP11Q9UKA4 1901 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 MYH2Q9UKX2 1941 aa11.54□□□□□ -0.56
ABCF1-205ENST00000475993 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 DPPA5A6NC42 116 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 CES2O00748 559 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 CREB3O43889 395 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 FLT3P36888 993 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 NPY5RQ15761 445 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 KRT71Q3SY84 523 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ZNF654Q8IZM8 581 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 MIPOL1Q8TD10 442 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ZFAND2BQ8WV99 257 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ATXN2LQ8WWM7 1075 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms