RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
DNMT3A-211ENST00000474887 MICU3Q86XE3 530 aa16.1■□□□□ 0.17
DNMT3A-211ENST00000474887 DHX38Q92620 1227 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-211ENST00000474887 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-211ENST00000474887 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-211ENST00000474887 NKX2-4Q9H2Z4 354 aa16.1■□□□□ 0.17
DNMT3A-211ENST00000474887 RTEL1Q9NZ71 1219 aa16.1■□□□□ 0.17
DNMT3A-211ENST00000474887 POU3F3P20264 500 aaPredicted RBP16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 FGD1P98174 961 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 SEMA3FQ13275 785 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 PPP2R2DQ66LE6 453 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 FAM43BQ6ZT52 329 aaPredicted RBP16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 HEATR3Q7Z4Q2 680 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 HERC6Q8IVU3 1022 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 SEPT1Q8WYJ6 367 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 RIC8AQ9NPQ8 531 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 YBX2Q9Y2T7 364 aaKnown RBP16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 UBIAD1Q9Y5Z9 338 aa16.09■□□□□ 0.17
DNMT3A-211ENST00000474887 SMIM10L2AP0DMW4 78 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 SMIM10L2BP0DMW5 78 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 RXRAP19793 462 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 PSMA5P28066 241 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 HSPA4P34932 840 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 CMTR1Q8N1G2 835 aaKnown RBP16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 GPKOWQ92917 476 aaPredicted RBP eCLIP16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 PRDM12Q9H4Q4 367 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 JADE2Q9NQC1 790 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 PCDHA6Q9UN73 950 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 PCDHA8Q9Y5H6 950 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 NRCAMQ92823 1304 aa16.08■□□□□ 0.16
DNMT3A-211ENST00000474887 RSPH10B2B2RC85 870 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 LGR5O75473 907 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 RSPH10BP0C881 870 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 ITGB5P18084 799 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 RABGGTBP53611 331 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 NAPAP54920 295 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 FUT2Q10981 343 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 AP3B2Q13367 1082 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 MTMR1Q13613 665 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 GPNMBQ14956 572 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 ZNF618Q5T7W0 954 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 TAF2Q6P1X5 1199 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 RPAINQ86UA6 219 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 CCDC12Q8WUD4 166 aaPredicted RBP16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 PPP1R13LQ8WUF5 828 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 TSPYL2Q9H2G4 693 aaPredicted RBP16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 RNPEPQ9H4A4 650 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 V9GY48 417 aaPredicted RBP16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 MYO9BQ13459 2157 aa16.07■□□□□ 0.16
DNMT3A-211ENST00000474887 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 CNTNAP5Q8WYK1 1306 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 KLF18A0A0U1RQI7 1052 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 GOLGA8AA7E2F4 631 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 GOLGA8BA8MQT2 603 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 NBNO60934 754 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 KCNA2P16389 499 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 THPOP40225 353 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 ADCY7P51828 1080 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 WDR5P61964 334 aaKnown RBP16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 TRAF7Q6Q0C0 670 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 ATXN2LQ8WWM7 1075 aaKnown RBP16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 RAD9AQ99638 391 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 SMARCAD1Q9H4L7 1026 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 ERAP1Q9NZ08 941 aa16.06■□□□□ 0.16
DNMT3A-211ENST00000474887 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 TLL1O43897 1013 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 ADAM17P78536 824 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 WWC2Q6AWC2 1192 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 NIPA1Q7RTP0 329 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 RSPH3Q86UC2 560 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 MXRA8Q9BRK3 442 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 ZBED2Q9BTP6 218 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 TRANK1O15050 2925 aa16.05■□□□□ 0.16
DNMT3A-211ENST00000474887 NFASCO94856 1347 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 ESYT2A0FGR8 921 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 RRN3P2A6NIE6 340 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 SORBS3O60504 671 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 CA3P07451 260 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 TCF7P36402 384 aaPredicted RBP16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 METAP2P50579 478 aaKnown RBP eCLIP16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 ZNF200P98182 395 aaPredicted RBP16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 CEP55Q53EZ4 464 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 SEPT8Q92599 483 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 APBB2Q92870 758 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 SDF4Q9BRK5 362 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
DNMT3A-211ENST00000474887 FAM217BQ9NTX9 383 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms