RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ADGRG6Q86SQ4 1221 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 C12orf50Q8NA57 414 aaPredicted RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 STKLD1Q8NE28 680 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 MYLK2Q9H1R3 596 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 AAASQ9NRG9 546 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 RGL1Q9NZL6 768 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 AIPL1Q9NZN9 384 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 ADAMTSL1Q8N6G6 1762 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 FRMPD4Q14CM0 1322 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SPDYE5A6NIY4 337 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SPATA31D3P0C874 917 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 GCAP28676 217 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SEC24CP53992 1094 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 BTNL9Q6UXG8 535 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SPATA31D4Q6ZUB0 917 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 TICAM1Q8IUC6 712 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 CLASRPQ8N2M8 674 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 SH2D3CQ8N5H7 860 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 USP38Q8NB14 1042 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 CCDC148Q8NFR7 591 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SPDYE1Q8NFV5 336 aaPredicted RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 FAM81AQ8TBF8 368 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 ANKS1AQ92625 1134 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 PTCD3Q96EY7 689 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 UBE2OQ9C0C9 1292 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 INIPQ9NRY2 104 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SERTAD1Q9UHV2 236 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 PCDHA6Q9UN73 950 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 ZNF232Q9UNY5 417 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 PLIN4Q96Q06 1357 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 DDX3YO15523 660 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 RNMTO43148 476 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 INHBBP09529 407 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 CALB2P22676 271 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 ITGA6P23229 1130 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 VARSP26640 1264 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 GUCY1A2P33402 732 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 PDE6BP35913 854 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 GPSM2P81274 684 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 TRIM28Q13263 835 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 SPCS2Q15005 226 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SF3B3Q15393 1217 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 ANKRD20A2Q5SQ80 823 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 TTC39AQ5SRH9 613 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 UBAP2Q5T6F2 1119 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 ANKRD20A1Q5TYW2 823 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 ANKRD20A3Q5VUR7 823 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 BORAQ6PGQ7 559 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SH2D5Q6ZV89 423 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 ZDHHC14Q8IZN3 488 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 CD101Q93033 1021 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 AIFM3Q96NN9 605 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 GANQ9H2C0 597 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 DNAJB4Q9UDY4 337 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SEC63Q9UGP8 760 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 PLA2G4CQ9UP65 541 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 PHIPQ8WWQ0 1821 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 AP1G2O75843 785 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 KRT16P08779 473 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 SMIM18P0DKX4 95 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 ANXA13P27216 316 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 PRKCIP41743 596 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 GRIA2P42262 883 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 PAPOLAP51003 745 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 ALDH5A1P51649 535 aaPredicted RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 C2orf54Q08AI8 447 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 BIRC2Q13490 618 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 CUL1Q13616 776 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 SAFBQ15424 915 aaKnown RBP eCLIP4.53□□□□□ -1.68
USP16-205ENST00000474835 IFI16Q16666 785 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 SLC35G1Q2M3R5 365 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 CEP85LQ5SZL2 805 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 DUS1LQ6P1R4 473 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 ERICH1Q86X53 443 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 MZB1Q8WU39 189 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 FAM192AQ9GZU8 254 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 ACBD3Q9H3P7 528 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 TMCO1Q9UM00 188 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 DICER1Q9UPY3 1922 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 RNF113AO15541 343 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 AFPP02771 609 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 RHOXF2BP0C7M4 288 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 IVDP26440 423 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 ADSSP30520 456 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 RBM5P52756 815 aaKnown RBP eCLIP4.53□□□□□ -1.68
USP16-205ENST00000474835 PPP2R2AP63151 447 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 CCT2P78371 535 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 HYIQ5T013 277 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 TRIM74Q86UV6 250 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 TRIM73Q86UV7 250 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 COL23A1Q86Y22 540 aaPredicted RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 NELFCDQ8IXH7 590 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 CNBD1Q8NA66 436 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 INPP5DQ92835 1189 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 PPP2R3CQ969Q6 453 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 RHOXF2Q9BQY4 288 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 TSGA10Q9BZW7 698 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 GPR88Q9GZN0 384 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 NHEJ1Q9H9Q4 299 aaPredicted RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 LGR6Q9HBX8 967 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms