RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CKBP12277 381 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 MYOGP15173 224 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 THPOP40225 353 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 XRRA1Q6P2D8 792 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 CNKSR3Q6P9H4 555 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 METTL7BQ6UX53 244 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 GIMAP8Q8ND71 665 aaPredicted RBP17.35■□□□□ 0.37
VARS-223ENST00000474643 BRF1Q92994 677 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 ATP6V0A1Q93050 837 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 CDHR1Q96JP9 859 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 COL25A1Q9BXS0 654 aaPredicted RBP17.35■□□□□ 0.37
VARS-223ENST00000474643 TUT1Q9H6E5 874 aaKnown RBP17.35■□□□□ 0.37
VARS-223ENST00000474643 CYP46A1Q9Y6A2 500 aa17.35■□□□□ 0.37
VARS-223ENST00000474643 hCG_1642624A0A1W2PR95 340 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 GOLGA8AA7E2F4 631 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 MYH7BA7E2Y1 1941 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 GOLGA8BA8MQT2 603 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 EFCAB14O75071 495 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 LGALS2P05162 132 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 SP2Q02086 613 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 SCN5AQ14524 2016 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 SKIV2LQ15477 1246 aaKnown RBP17.34■□□□□ 0.37
VARS-223ENST00000474643 UTP14CQ5TAP6 766 aaKnown RBP17.34■□□□□ 0.37
VARS-223ENST00000474643 PCNX4Q63HM2 1172 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 APOA5Q6Q788 366 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 RUFY3Q7L099 469 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 HERC6Q8IVU3 1022 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
VARS-223ENST00000474643 FANCBQ8NB91 859 aa17.34■□□□□ 0.37
VARS-223ENST00000474643 GPKOWQ92917 476 aaPredicted RBP eCLIP17.34■□□□□ 0.37
VARS-223ENST00000474643 INPP4AQ96PE3 977 aaPredicted RBP17.34■□□□□ 0.37
VARS-223ENST00000474643 RBM28Q9NW13 759 aaKnown RBP17.34■□□□□ 0.37
VARS-223ENST00000474643 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 SPATA31C2B4DYI2 1134 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 HAS3O00219 553 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 PIK3CDO00329 1044 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 NAPAP54920 295 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.36
VARS-223ENST00000474643 APOBRQ0VD83 1088 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 IKBKEQ14164 716 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 RTN1Q16799 776 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 TMTC3Q6ZXV5 915 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 CERS4Q9HA82 394 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 BRPF3Q9ULD4 1205 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 CUL9Q8IWT3 2517 aa17.33■□□□□ 0.36
VARS-223ENST00000474643 PRUNE2Q8WUY3 3088 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 SMIM10L2AP0DMW4 78 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 SMIM10L2BP0DMW5 78 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 HOXD8P13378 290 aaPredicted RBP17.32■□□□□ 0.36
VARS-223ENST00000474643 ICAM3P32942 547 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 ZNF200P98182 395 aaPredicted RBP17.32■□□□□ 0.36
VARS-223ENST00000474643 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 ARNTL2Q8WYA1 636 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 DHX38Q92620 1227 aaKnown RBP17.32■□□□□ 0.36
VARS-223ENST00000474643 UPF3BQ9BZI7 483 aaKnown RBP17.32■□□□□ 0.36
VARS-223ENST00000474643 ZSWIM6Q9HCJ5 1215 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 PKD2L1Q9P0L9 805 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 GBF1Q92538 1859 aa17.32■□□□□ 0.36
VARS-223ENST00000474643 RSPH10B2B2RC85 870 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 MEIS2O14770 477 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 RSPH10BP0C881 870 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.369e-7■■■■■ 28.2
VARS-223ENST00000474643 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
VARS-223ENST00000474643 RBL2Q08999 1139 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 UBE2SQ16763 222 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 C16orf70Q9BSU1 422 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 PDRG1Q9NUG6 133 aa17.31■□□□□ 0.36
VARS-223ENST00000474643 ABHD14A-ACY1A0A1B0GW23 586 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 SEC24BO95487 1268 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 CTSHP09668 335 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 ANAPC15P60006 121 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 ARHGAP4P98171 946 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 MTMR1Q13613 665 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 TJAP1Q5JTD0 557 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 TRIM50Q86XT4 487 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 GPRASP2Q96D09 838 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 VWCEQ96DN2 955 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 GPR20Q99678 358 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 SENP7Q9BQF6 1050 aa17.3■□□□□ 0.36
VARS-223ENST00000474643 VCANP13611 3396 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 CCDC196A0A1B0GTZ2 297 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 NBNO60934 754 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 LGR5O75473 907 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 TCF7P36402 384 aaPredicted RBP17.29■□□□□ 0.36
VARS-223ENST00000474643 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 FAM117BQ6P1L5 589 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 SERINC5Q86VE9 423 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 GLG1Q92896 1179 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 CTAGE1Q96RT6 745 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 SETD4Q9NVD3 440 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 PCDHA6Q9UN73 950 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 PCDHA8Q9Y5H6 950 aa17.29■□□□□ 0.36
VARS-223ENST00000474643 TRIP12Q14669 1992 aaPredicted RBP17.29■□□□□ 0.36
VARS-223ENST00000474643 CHD9Q3L8U1 2897 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 TREHO43280 583 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 CXCL10P02778 98 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms