RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ZNF3P17036 446 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 EPS15P42566 896 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 DGKGP49619 791 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 HADHBP55084 474 aaKnown RBP3.84□□□□□ -1.8
UBR3-208ENST00000474426 EVCP57679 992 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 UBXN1Q04323 297 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 PICALMQ13492 652 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 CRTC2Q53ET0 693 aaPredicted RBP3.84□□□□□ -1.8
UBR3-208ENST00000474426 NBPF14Q5TI25 921 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 NEPROQ6NW34 567 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 BICDL1Q6ZP65 573 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 PTF1AQ7RTS3 328 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.84□□□□□ -1.8
UBR3-208ENST00000474426 GLYCTKQ8IVS8 523 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 CDC26Q8NHZ8 85 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 FBXO27Q8NI29 283 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 RNF139Q8WU17 664 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 POF1BQ8WVV4 589 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 DNAJC7Q99615 494 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 PHF20Q9BVI0 1012 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 CCDC8Q9H0W5 538 aaPredicted RBP3.84□□□□□ -1.8
UBR3-208ENST00000474426 EHD1Q9H4M9 534 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 MVB12BQ9H7P6 319 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.84□□□□□ -1.8
UBR3-208ENST00000474426 DCTN4Q9UJW0 460 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 PCDHGB5Q9Y5G0 923 aa3.84□□□□□ -1.8
UBR3-208ENST00000474426 ARHGAP10A1A4S6 786 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 MOXD2PA6NHM9 499 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 INO80B-WBP1J3KQ70 363 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 KRIT1O00522 736 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 NVLO15381 856 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 ADCY5O95622 1261 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ATP5BP06576 529 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 BCRP11274 1271 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 PRKAR1BP31321 381 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 GUCY1A2P33402 732 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ETV1P50549 477 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 PSMD7P51665 324 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ZNF280AP59817 542 aaPredicted RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 ATP2B2Q01814 1243 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 MSLNQ13421 630 aaPredicted RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 PPP2R5DQ14738 602 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 THEMIS2Q5TEJ8 643 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 KIAA0319Q5VV43 1072 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 TMEM132EQ6IEE7 984 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 TTBK2Q6IQ55 1244 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 C1orf228Q6PIY5 440 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 NAXEQ8NCW5 288 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 NEDD1Q8NHV4 660 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CCDC110Q8TBZ0 833 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 GJA10Q969M2 543 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 HOOK2Q96ED9 719 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ASB2Q96Q27 587 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 GBP3Q9H0R5 595 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 NCOR1P1Q9H4R4 102 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 STRN4Q9NRL3 753 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 SDHAF3Q9NRP4 125 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ZFATQ9P243 1243 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 TMEM232C9JQI7 657 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 PI4K2BG5E9Z4 385 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 YKT6O15498 198 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 SEC24DO94855 1032 aaPredicted RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 SLC3A2P08195 630 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 TOP1P11387 765 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 HPGDP15428 266 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ADCY8P40145 1251 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ACADSBP45954 432 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 GCLCP48506 637 aaPredicted RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 CLK2P49760 499 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 RARSP54136 660 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 ITGA7Q13683 1181 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 STK11Q15831 433 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 FUT11Q495W5 492 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 MAP3K19Q56UN5 1328 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 STXBP5Q5T5C0 1151 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 FBXW10Q5XX13 1052 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 ANGPTL8Q6UXH0 198 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 USP31Q70CQ4 1352 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 LUZP1Q86V48 1076 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 SPATA24Q86W54 205 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 RGL4Q8IZJ4 473 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 TMEM57Q8N5G2 664 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 FBXO18Q8NFZ0 1043 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 PI4K2BQ8TCG2 481 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 NSUN6Q8TEA1 469 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 ATP6V0A1Q93050 837 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 EGLN2Q96KS0 407 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CATSPER2Q96P56 530 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CCT7Q99832 543 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 C19orf43Q9BQ61 176 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 TUBA1CQ9BQE3 449 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 DMTF1Q9Y222 760 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 MYO3BQ8WXR4 1341 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 HNRNPCL2B2RXH8 293 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 STMND1H3BQB6 276 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 KLF4O43474 513 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 GRIN3BO60391 1043 aa3.83□□□□□ -1.8
UBR3-208ENST00000474426 CTNND1O60716 968 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 HNRNPCL1O60812 293 aaKnown RBP3.83□□□□□ -1.8
UBR3-208ENST00000474426 EOMESO95936 686 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms