RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CLUL1Q15846 466 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 RUFY4Q6ZNE9 571 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 PLEKHM2Q8IWE5 1019 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 TMEM192Q8IY95 271 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-223ENST00000473345 BANK1Q8NDB2 785 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 LINC01599Q8WXQ3 324 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 ATP6V0A1Q93050 837 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 RILPL2Q969X0 211 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 FBXL18Q96ME1 805 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
MCF2L-223ENST00000473345 KATNAL1Q9BW62 490 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 KAT14Q9H8E8 782 aa11.21□□□□□ -0.61
MCF2L-223ENST00000473345 MYH7BA7E2Y1 1941 aa11.21□□□□□ -0.62
MCF2L-223ENST00000473345 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 B4DLN1 442 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 H3BRB1 525 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 ZNF213O14771 459 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 TBX10O75333 385 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 CSPG5O95196 566 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 PARNO95453 639 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 IGHDP01880 384 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 CHRNA1P02708 482 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 AMHP03971 560 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 PCP11498 1178 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 MRE11P49959 708 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 HDAC1Q13547 482 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 CWC27Q6UX04 472 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 HFE2Q6ZVN8 426 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 RPAINQ86UA6 219 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 MCF2L2Q86YR7 1114 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 PABPC5Q96DU9 382 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 UIMC1Q96RL1 719 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 PIGSQ96S52 555 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 TUT1Q9H6E5 874 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 ALG13Q9NP73 1137 aaKnown RBP11.2□□□□□ -0.62
MCF2L-223ENST00000473345 DOCK5Q9H7D0 1870 aa11.2□□□□□ -0.62
MCF2L-223ENST00000473345 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 C17orf102A2RUQ5 167 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 DCXO43602 365 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
MCF2L-223ENST00000473345 EFCAB14O75071 495 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 DNAJB1P25685 340 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 MGAT3Q09327 533 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 FCHSD1Q86WN1 690 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 GPR20Q99678 358 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 AMNQ9BXJ7 453 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 MAF1Q9H063 256 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 RNF41Q9H4P4 317 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-223ENST00000473345 CLDND1Q9NY35 253 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 RTEL1Q9NZ71 1219 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 PCDHGC5Q9Y5F6 944 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
MCF2L-223ENST00000473345 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 SPATA31C2B4DYI2 1134 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 ZBTB5O15062 677 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 FAM26DQ5JW98 314 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 PPP4R3CPQ6ZMV5 832 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 EP400NLQ6ZTU2 488 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 CYFIP1Q7L576 1253 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 ADGRD2Q7Z7M1 963 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-223ENST00000473345 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 CRIPAKQ8N1N5 446 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 LMBR1Q8WVP7 490 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 INPP4AQ96PE3 977 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-223ENST00000473345 YME1L1Q96TA2 773 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 IFIH1Q9BYX4 1025 aaKnown RBP11.18□□□□□ -0.62
MCF2L-223ENST00000473345 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
MCF2L-223ENST00000473345 RIOX1Q9H6W3 641 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 MUTYHQ9UIF7 546 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 MYO7AQ13402 2215 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 WDFY4Q6ZS81 3184 aa11.18□□□□□ -0.62
MCF2L-223ENST00000473345 MBTPS2O43462 519 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 ATP9AO75110 1047 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 GHRP10912 638 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 ICAM3P32942 547 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 GATMP50440 423 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 RBM10P98175 930 aaKnown RBP11.17□□□□□ -0.62
MCF2L-223ENST00000473345 LPIN1Q14693 890 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 GRM4Q14833 912 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 TIGD5Q53EQ6 642 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 MARCH8Q5T0T0 291 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 IER5LQ5T953 404 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 IQCA1Q86XH1 822 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 ADHFE1Q8IWW8 467 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 PRSS33Q8NF86 280 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 SEPT8Q92599 483 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 ZNF689Q96CS4 500 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms