RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 DDX41Q9UJV9 622 aaKnown RBP11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 CEP131Q9UPN4 1083 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 GOLGA6L4A6NEF3 574 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 BTBD18B2RXH4 712 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 SPATA31C2B4DYI2 1134 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 ITGB5P18084 799 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 UBA1P22314 1058 aaKnown RBP11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 CPT1AP50416 773 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 CHMP4BP1P59074 171 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 INF2Q27J81 1249 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 FOXD4L6Q3SYB3 417 aaPredicted RBP11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 CEP55Q53EZ4 464 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 FOXD4L3Q6VB84 417 aaPredicted RBP11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 PIK3AP1Q6ZUJ8 805 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 PLA2G4DQ86XP0 818 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 CYP2W1Q8TAV3 490 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 TBCKQ8TEA7 893 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 AFG1LQ8WV93 481 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 GPRASP2Q96D09 838 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 SPATA33Q96N06 139 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 UIMC1Q96RL1 719 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 JADE2Q9NQC1 790 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 Q9Y3F1 56 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 UBIAD1Q9Y5Z9 338 aa11.97□□□□□ -0.49
SMARCD3-208ENST00000472789 FRMPD3Q5JV73 1810 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 NOP56O00567 594 aaKnown RBP11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 BMP15O95972 392 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 ASGR1P07306 291 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 TGFB3P10600 412 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 ICAM3P32942 547 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 MNX1P50219 401 aaPredicted RBP11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 ACLYP53396 1101 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 SP2Q02086 613 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 DNM1Q05193 864 aaKnown RBP11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 SEMA3FQ13275 785 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 NR5A1Q13285 461 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 LAMC2Q13753 1193 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 NEDD9Q14511 834 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 NPY5RQ15761 445 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 PRR16Q569H4 304 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 CXCL17Q6UXB2 119 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 CYFIP1Q7L576 1253 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 KLHDC9Q8NEP7 349 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 SPATA32Q96LK8 384 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 ANP32EQ9BTT0 268 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 HTATIP2Q9BUP3 242 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 PHF24Q9UPV7 400 aa11.96□□□□□ -0.49
SMARCD3-208ENST00000472789 KIAA1217Q5T5P2 1943 aa11.96□□□□□ -0.5
SMARCD3-208ENST00000472789 A0A1W2PQ45 241 aaPredicted RBP11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 A0A1W2PQY0 241 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 MOXD2PA6NHM9 499 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 M0R2N6 131 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 CTAGE5O15320 804 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 CYP3A4P08684 503 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 ARP10275 920 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 ATP2B1P20020 1258 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 CST5P28325 142 aaPredicted RBP11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 SF3A1Q15459 793 aaKnown RBP11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 GLT1D1Q96MS3 346 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 NAP1L4Q99733 375 aaKnown RBP11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 SDF4Q9BRK5 362 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 STARD7Q9NQZ5 370 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 KCNH7Q9NS40 1196 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 POLR3EQ9NVU0 708 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 PRUNE2Q8WUY3 3088 aa11.95□□□□□ -0.5
SMARCD3-208ENST00000472789 ELP1O95163 1332 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 FAM86B1E9PN63 330 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 DDX39AO00148 427 aaKnown RBP11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 MEIS1O00470 390 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 DLL1O00548 723 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 SOX1O00570 391 aaPredicted RBP11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 MAFGO15525 162 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 ATP9AO75110 1047 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 PRPF40AO75400 957 aaKnown RBP11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 TDP2O95551 362 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 YEATS4O95619 227 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 MMP3P08254 477 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 FAM86B2P0C5J1 330 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 USP11P51784 963 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 STK38Q15208 465 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 DGKDQ16760 1214 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 NEK8Q86SG6 692 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 TMEM87AQ8NBN3 555 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 ZNF577Q9BSK1 485 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 BCAS3Q9H6U6 928 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 TFIP11Q9UBB9 837 aaKnown RBP11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 ATP11BQ9Y2G3 1177 aa11.94□□□□□ -0.5
SMARCD3-208ENST00000472789 MARCH6O60337 910 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms