RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 ATP1A1P05023 1023 aaKnown RBP16.68■□□□□ 0.26
UBXN11-213ENST00000472155 CHMP4BP1P59074 171 aa16.68■□□□□ 0.26
UBXN11-213ENST00000472155 CCDC122Q5T0U0 273 aa16.68■□□□□ 0.26
UBXN11-213ENST00000472155 RSBN1LQ6PCB5 846 aaPredicted RBP16.68■□□□□ 0.26
UBXN11-213ENST00000472155 LARGE2Q8N3Y3 721 aa16.68■□□□□ 0.26
UBXN11-213ENST00000472155 NAPGQ99747 312 aaPredicted RBP16.68■□□□□ 0.26
UBXN11-213ENST00000472155 TANGO6Q9C0B7 1094 aa16.68■□□□□ 0.26
UBXN11-213ENST00000472155 PNMA6AP0CW24 399 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-213ENST00000472155 KCNA3P22001 575 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 SREBF1P36956 1147 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 AMPD2Q01433 879 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 FKBP15Q5T1M5 1219 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 SRGAP1Q7Z6B7 1085 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 PNKPQ96T60 521 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 GMLQ99445 158 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 ANKZF1Q9H8Y5 726 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 MACROD2A1Z1Q3 448 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 LRRC53A6NM62 1247 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 SFI1A8K8P3 1242 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 MAN2A1Q16706 1144 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
UBXN11-213ENST00000472155 DEFB132Q7Z7B7 95 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 NOA1Q8NC60 698 aaKnown RBP16.67■□□□□ 0.26
UBXN11-213ENST00000472155 WDR18Q9BV38 432 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 NLRC4Q9NPP4 1024 aa16.67■□□□□ 0.26
UBXN11-213ENST00000472155 DPEP1P16444 411 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 HOXD13P35453 343 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 LRRC63Q05C16 580 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 KCNA1Q09470 495 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 AP3B2Q13367 1082 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 RRAGAQ7L523 313 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 PIGOQ8TEQ8 1089 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 NT5C3AQ9H0P0 336 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 VAV3Q9UKW4 847 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 CHMP2AO43633 222 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 RHOXF2BP0C7M4 288 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 STAT2P52630 851 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 DLGAP5Q15398 846 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 BAP1Q92560 729 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 GOLGA1Q92805 767 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 RHOXF2Q9BQY4 288 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 REEP2Q9BRK0 252 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 KCTD10Q9H3F6 313 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
UBXN11-213ENST00000472155 STK32BQ9NY57 414 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 KDM3AQ9Y4C1 1321 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 MYH10P35580 1976 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 KRT18P05783 430 aaKnown RBP16.66■□□□□ 0.26
UBXN11-213ENST00000472155 PLA2G4AP47712 749 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 GIT2Q14161 759 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 CTTNQ14247 550 aaKnown RBP16.66■□□□□ 0.26
UBXN11-213ENST00000472155 NBPF9Q3BBW0 867 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 BTNL9Q6UXG8 535 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
UBXN11-213ENST00000472155 KIAA1328Q86T90 577 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 RUSC1Q9BVN2 902 aa16.66■□□□□ 0.26
UBXN11-213ENST00000472155 IGLV3-22A0A075B6J6 115 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 EGFRP00533 1210 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 PPP1R2P41236 205 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 MMP14P50281 582 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 PSMD2Q13200 908 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 Q4G0T1 1027 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 GPR161Q8N6U8 529 aaKnown RBP16.65■□□□□ 0.26
UBXN11-213ENST00000472155 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 NUP58Q9BVL2 599 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 EMILIN3Q9NT22 766 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 ZNF185O15231 689 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 NOL4O94818 638 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 MYBP10242 640 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 EIF4A3P38919 411 aaKnown RBP16.65■□□□□ 0.26
UBXN11-213ENST00000472155 CCDC40Q4G0X9 1142 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 CC2D1AQ6P1N0 951 aaPredicted RBP16.65■□□□□ 0.26
UBXN11-213ENST00000472155 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 SFR1Q86XK3 245 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 SMAP1Q8IYB5 467 aaPredicted RBP16.65■□□□□ 0.26
UBXN11-213ENST00000472155 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 BHMT2Q9H2M3 363 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 MLXIPQ9HAP2 919 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 PLAGL2Q9UPG8 496 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 COL4A3BPQ9Y5P4 624 aa16.65■□□□□ 0.26
UBXN11-213ENST00000472155 PRPF6O94906 941 aaKnown RBP16.64■□□□□ 0.25
UBXN11-213ENST00000472155 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.25
UBXN11-213ENST00000472155 ZNF76P36508 570 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 FKBP3Q00688 224 aaKnown RBP16.64■□□□□ 0.25
UBXN11-213ENST00000472155 KRT222Q8N1A0 295 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 CAPZA3Q96KX2 299 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 HAUS4Q9H6D7 363 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 ZNHIT6Q9NWK9 470 aaKnown RBP16.64■□□□□ 0.25
UBXN11-213ENST00000472155 MYO6Q9UM54 1294 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 CCDC65Q8IXS2 484 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms