RNA–Protein interactions for RNA: ENST00000472056.5

COL6A3-209, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 8,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-209ENST00000472056 MAPK4P31152 587 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 CASP14P31944 242 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 TRADDQ15628 312 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 DAB2IPQ5VWQ8 1189 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 NT5C1BQ96P26 610 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 ASPSCR1Q9BZE9 553 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 SH3TC1Q8TE82 1336 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 POC1B-GALNT4F8VUJ3 575 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 AP3B1O00203 1094 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 ZBTB24O43167 697 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-209ENST00000472056 HSPA13P48723 471 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 EPM2AIP1Q7L775 607 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-209ENST00000472056 CNGA3Q16281 694 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 DEPTORQ8TB45 409 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 PLIN2Q99541 437 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 ATP6V0A4Q9HBG4 840 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 CYP26B1Q9NR63 512 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 DBNLQ9UJU6 430 aaKnown RBP14.32□□□□□ -0.12
COL6A3-209ENST00000472056 C16orf96A6NNT2 1141 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 LIG4P49917 911 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 MRPL28Q13084 256 aaKnown RBP14.32□□□□□ -0.12
COL6A3-209ENST00000472056 STAP2Q9UGK3 403 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 CDH2P19022 906 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-209ENST00000472056 CYLC2Q14093 348 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-209ENST00000472056 FAM26FQ5R3K3 315 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
COL6A3-209ENST00000472056 TMTC4Q5T4D3 741 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 FBXO38Q6PIJ6 1188 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 RNF169Q8NCN4 708 aa14.32□□□□□ -0.12
COL6A3-209ENST00000472056 TRPA1O75762 1119 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 FOXP3Q9BZS1 431 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 PFASO15067 1338 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 ERBB4Q15303 1308 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 TMOD1P28289 359 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 IFNAR2P48551 515 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 PPP2R2AP63151 447 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 KRT75O95678 551 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 HSPA2P54652 639 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 POLR2FP61218 127 aaKnown RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 SYDE1Q6ZW31 735 aaPredicted RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 MAML1Q92585 1016 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 RBM41Q96IZ5 413 aaKnown RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 GPHNQ9NQX3 736 aaPredicted RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 ATP8B3O60423 1300 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 ALKBH8Q96BT7 664 aaKnown RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 XAGE2Q96GT9 111 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 IL1RAPL1Q9NZN1 696 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 ZFP69BQ9UJL9 534 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 PYGMP11217 842 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 BIRC2Q13490 618 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 PYROXD1Q8WU10 500 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 STX18Q9P2W9 335 aaKnown RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 A0A1W2PP64 1363 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 WDR70Q9NW82 654 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 CA4P22748 312 aa14.31□□□□□ -0.12
COL6A3-209ENST00000472056 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 LARP4BQ92615 738 aaKnown RBP14.31□□□□□ -0.12
COL6A3-209ENST00000472056 PIK3CAP42336 1068 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 ARHGAP44Q17R89 818 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 P2RX5Q93086 422 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 OTUB1Q96FW1 271 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 KLC2Q9H0B6 622 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 NCOA5Q9HCD5 579 aaKnown RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 GCNT4Q9P109 453 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 SERTAD1Q9UHV2 236 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 CDV3Q9UKY7 258 aaKnown RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 ZBTB21Q9ULJ3 1066 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 BUB1O43683 1085 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 HNRNPH2P55795 449 aaKnown RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 NUGGCQ68CJ6 796 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 NHEJ1Q9H9Q4 299 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 KRT82Q9NSB4 513 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 CAPN11Q9UMQ6 739 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 TTLL3Q9Y4R7 772 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 MEIS1O00470 390 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 CCND1P24385 295 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 CUL4AQ13619 759 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 UIMC1Q96RL1 719 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 DPH5Q9H2P9 285 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 KRT28Q7Z3Y7 464 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 SLITRK6Q9H5Y7 841 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 USP19O94966 1318 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 CHL1O00533 1208 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 IL2RBP14784 551 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 TMED2Q15363 201 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 SPATA5Q8NB90 893 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 CHCHD3Q9NX63 227 aaKnown RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 SLC12A6Q9UHW9 1150 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 MRPL11Q9Y3B7 192 aaKnown RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 SLFN14P0C7P3 912 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 S100A5P33763 92 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 MRPS15P82914 257 aaKnown RBP14.3□□□□□ -0.12
COL6A3-209ENST00000472056 C1orf146Q5VVC0 180 aa14.3□□□□□ -0.12
COL6A3-209ENST00000472056 JDP2Q8WYK2 163 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms