RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 PIK3R6Q5UE93 754 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 ABHD17CQ6PCB6 329 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 VSIG10LQ86VR7 867 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 RCBTB1Q8NDN9 531 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 OR2W6PQ8NHA6 318 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 FCRL2Q96LA5 508 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-204ENST00000471245 CELF4Q9BZC1 486 aaKnown RBP7.62□□□□□ -1.19
CKS1B-204ENST00000471245 SAMD15Q9P1V8 674 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 CFDP1Q9UEE9 299 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-204ENST00000471245 CCDC39Q9UFE4 941 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 ZNF281Q9Y2X9 895 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 TIAM1Q13009 1591 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 MBD5Q9P267 1494 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 RTEL1-TNFRSF6BF6WH68 1400 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 DHX29Q7Z478 1369 aaKnown RBP7.61□□□□□ -1.19
CKS1B-204ENST00000471245 MYO1BO43795 1136 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 FKTNO75072 461 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 TBC1D8O95759 1140 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 ESR1P03372 595 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 LCP1P13796 627 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 BPIP17213 487 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 EVA1CP58658 441 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 ODR4Q5SWX8 454 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 RNF219Q5W0B1 726 aaPredicted RBP7.61□□□□□ -1.19
CKS1B-204ENST00000471245 ZC3H7AQ8IWR0 971 aaKnown RBP7.61□□□□□ -1.19
CKS1B-204ENST00000471245 BCL7CQ8WUZ0 217 aaPredicted RBP7.61□□□□□ -1.19
CKS1B-204ENST00000471245 ASB11Q8WXH4 323 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 WNK4Q96J92 1243 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 HRASLS5Q96KN8 279 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 ERVK13-1Q9NX77 482 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 APOBEC2Q9Y235 224 aaKnown RBP7.61□□□□□ -1.19
CKS1B-204ENST00000471245 SLC5A6Q9Y289 635 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 PHLPP1O60346 1717 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 CEP152O94986 1710 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 FAM135BQ49AJ0 1406 aa7.61□□□□□ -1.19
CKS1B-204ENST00000471245 SCO2A0A1W2PP80 73 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 CBX4O00257 560 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 KIF3BO15066 747 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 GPR39O43194 453 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 ZEB2O60315 1214 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 GLRX3O76003 335 aaKnown RBP7.6□□□□□ -1.19
CKS1B-204ENST00000471245 GTF2A2P52657 109 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 EGR3Q06889 387 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 INF2Q27J81 1249 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 MBLAC2Q68D91 279 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 CREG2Q8IUH2 290 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 NAT16Q8N8M0 369 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 PCDH19Q8TAB3 1148 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 WDR66Q8TBY9 1149 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 PANK1Q8TE04 598 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 USP7Q93009 1102 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 TTC1Q99614 292 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 IFT22Q9H7X7 185 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.6□□□□□ -1.19
CKS1B-204ENST00000471245 ATP13A1Q9HD20 1204 aa7.6□□□□□ -1.19
CKS1B-204ENST00000471245 CCNB3Q8WWL7 1395 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 ZNF644Q9H582 1327 aaPredicted RBP7.59□□□□□ -1.19
CKS1B-204ENST00000471245 WASHC2CQ9Y4E1 1318 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 SOD2P04179 222 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 CKMP06732 381 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 GRK2P25098 689 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 GRK3P35626 688 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 GUCY2FP51841 1108 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 STAT4Q14765 748 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 FAM47CQ5HY64 1035 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 SPATS2Q86XZ4 545 aaKnown RBP7.59□□□□□ -1.19
CKS1B-204ENST00000471245 IGSF22Q8N9C0 903 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 LMCD1Q9NZU5 365 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 PCDHA2Q9Y5H9 948 aa7.59□□□□□ -1.19
CKS1B-204ENST00000471245 SCAF11Q99590 1463 aaKnown RBP7.59□□□□□ -1.19
CKS1B-204ENST00000471245 MAP3K1Q13233 1512 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 ERVK-7P63135 1459 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 FAM47E-STBD1D6RA91 191 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 GSTA4O15217 222 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 PARNO95453 639 aaKnown RBP7.58□□□□□ -1.2
CKS1B-204ENST00000471245 F2P00734 622 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 SCNN1BP51168 640 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 RPL11P62913 178 aaKnown RBP7.58□□□□□ -1.2
CKS1B-204ENST00000471245 DSG1Q02413 1049 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 LAPTM5Q13571 262 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 AOC3Q16853 763 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 TMEM177Q53S58 311 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 WAPLQ7Z5K2 1190 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 PI4K2BQ8TCG2 481 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 JDP2Q8WYK2 163 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 CABP5Q9NP86 173 aa7.58□□□□□ -1.2
CKS1B-204ENST00000471245 ANGEL1Q9UNK9 670 aaKnown RBP7.58□□□□□ -1.2
CKS1B-204ENST00000471245 TIMM13Q9Y5L4 95 aaPredicted RBP7.58□□□□□ -1.2
CKS1B-204ENST00000471245 ABCC3O15438 1527 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 SLIT1O75093 1534 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 NCOA2Q15596 1464 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 CCDC141Q6ZP82 1450 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 ARHGAP23Q9P227 1491 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 C7orf72A4D263 438 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 M0R2C6 588 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 MECP2P51608 486 aaKnown RBP7.57□□□□□ -1.2
CKS1B-204ENST00000471245 LSAMPQ13449 338 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 FAM50AQ14320 339 aaKnown RBP7.57□□□□□ -1.2
CKS1B-204ENST00000471245 HLA-DQA1Q5Y7H0 255 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 NFXL1Q6ZNB6 911 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms