RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 HNRNPCP07910 306 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS50-210ENST00000471188 FAM200BP0CF97 657 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 CHN1P15882 459 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 PAX3P23760 479 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 IARSP41252 1262 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 SARSP49591 514 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 RASSF7Q02833 373 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 ZNF844Q08AG5 666 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 PAK1Q13153 545 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 SLC39A6Q13433 755 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 ZRSR2Q15696 482 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 WASHC4Q2M389 1173 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 TCP11X2Q5H9J9 407 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 BICDL1Q6ZP65 573 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 MGARPQ8TDB4 240 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 NELFBQ8WX92 580 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 SLC26A6Q9BXS9 759 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 SNRKQ9NRH2 765 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 INTS9Q9NV88 658 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 ADAM22Q9P0K1 906 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 FBXL5Q9UKA1 691 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 PNMA2Q9UL42 364 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 ZMYND8Q9ULU4 1186 aaPredicted RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 SLC12A4Q9UP95 1085 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 BZW2Q9Y6E2 419 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 ZNF609O15014 1411 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 CRB1P82279 1406 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 MYH13Q9UKX3 1938 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 HSPD1P10809 573 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 CEBPAP49715 358 aaPredicted RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 NCALDP61601 193 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 SFSWAPQ12872 951 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 TTLL12Q14166 644 aaPredicted RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 RCN2Q14257 317 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 PTPROQ16827 1216 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 INF2Q27J81 1249 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 WDR59Q6PJI9 974 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 C2CD5Q86YS7 1000 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 SNRNP27Q8WVK2 155 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 EPSTI1Q96J88 318 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 MAP3K14Q99558 947 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 MMTAG2Q9BU76 263 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 MOV10L1Q9BXT6 1211 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 TRIM31Q9BZY9 425 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 CSRNP2Q9H175 543 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 ESF1Q9H501 851 aaKnown RBP4.62□□□□□ -1.67
VPS50-210ENST00000471188 ETNK1Q9HBU6 452 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 INTUQ9ULD6 942 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 MAP3K2Q9Y2U5 619 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 CDC42BPGQ6DT37 1551 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 SETBP1Q9Y6X0 1596 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 CRYBG1Q9Y4K1 1723 aa4.62□□□□□ -1.67
VPS50-210ENST00000471188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 RAD51CO43502 376 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 FTCDO95954 541 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 PLEKP08567 350 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 GSTT1P30711 240 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 IGHMBP2P38935 993 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 MAGEA1P43355 309 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TNNC1P63316 161 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 RNASELQ05823 741 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 CUL4BQ13620 913 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 EMC10Q5UCC4 262 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 Q6ZNB5 142 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ZC3H18Q86VM9 953 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 LCA5Q86VQ0 697 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 MB21D1Q8N884 522 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ATL2Q8NHH9 583 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 UHMK1Q8TAS1 419 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 WDR66Q8TBY9 1149 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 DNAJC9Q8WXX5 260 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TRIM47Q96LD4 638 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 NUDCD1Q96RS6 583 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 PRMT1Q99873 361 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 DBNDD2Q9BQY9 259 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 MYL10Q9BUA6 226 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 FAM129AQ9BZQ8 928 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TRIM7Q9C029 511 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ZWILCHQ9H900 591 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 CNOT10Q9H9A5 744 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 PLCB1Q9NQ66 1216 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 GDF3Q9NR23 364 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 DDX21Q9NR30 783 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS50-210ENST00000471188 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 DBNLQ9UJU6 430 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 PACSIN2Q9UNF0 486 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 KCNJ14Q9UNX9 436 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 CHMP2BQ9UQN3 213 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 MYO5BQ9ULV0 1848 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 COL16A1Q07092 1604 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 AHDC1Q5TGY3 1603 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 ADGRB1O14514 1584 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TRIM49BA6NDI0 452 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 UBE2Q2LH0YL09 131 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 CYP27B1O15528 508 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ACTN4O43707 911 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 RARAP10276 462 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ATP6V1C1P21283 382 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 KCNA3P22001 575 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 KLK7P49862 253 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms