RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 MYL1P05976 194 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 RASSF7Q02833 373 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 C11orf74Q86VG3 221 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 C7orf31Q8N865 590 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 CNBD1Q8NA66 436 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 RFWD2Q8NHY2 731 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ANKRD49Q8WVL7 239 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 PBXIP1Q96AQ6 731 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 AS3MTQ9HBK9 375 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ATP8A1Q9Y2Q0 1164 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 MAST3O60307 1309 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 RPN1P04843 607 aaKnown RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 HDLBPQ00341 1268 aaKnown RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 TRAPPC3LQ5T215 181 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 FAM160B1Q5W0V3 765 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ANKS3Q6ZW76 656 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 MYRIPQ8NFW9 859 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 DHX38Q92620 1227 aaKnown RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 MAGOHBQ96A72 148 aaKnown RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 SH3GL3Q99963 347 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 NT5C3AQ9H0P0 336 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 SEPT9Q9UHD8 586 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 DCTN3O75935 186 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 GUCY2CP25092 1073 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 MFAP3P55082 362 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 TFDP1Q14186 410 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 STXBP2Q15833 593 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 KRT77Q7Z794 578 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 SIX6OS1Q8N1H7 587 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 TGFBRAP1Q8WUH2 860 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ZCWPW1Q9H0M4 648 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 KIAA0586Q9BVV6 1533 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 RNF103-CHMP3A0A140T963 221 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 SPDYE5A6NIY4 337 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 H0Y3Z8 333 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 APOA4P06727 396 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ELF1P32519 619 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 PLTPP55058 493 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ATP8B2P98198 1209 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 DDB1Q16531 1140 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 SPDYE7PQ495Y7 208 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 FAM47AQ5JRC9 791 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 MMS22LQ6ZRQ5 1243 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 TRIM69Q86WT6 500 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 KCNV2Q8TDN2 545 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 RNF139Q8WU17 664 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ZC3H15Q8WU90 426 aaKnown RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ULK4Q96C45 1275 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 OPTNQ96CV9 577 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 CALN1Q9BXU9 219 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 STK32BQ9NY57 414 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 POGZQ7Z3K3 1410 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 KIF13AQ9H1H9 1805 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 TRIM37O94972 964 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ECEL1O95672 775 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 KRT75O95678 551 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 PTK2Q05397 1052 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 TRIM71Q2Q1W2 868 aaKnown RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 OR6B2Q6IFH4 312 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 DPP8Q6V1X1 898 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 HSPH1Q92598 858 aa7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ASCC2Q9H1I8 757 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ACTR5Q9H9F9 607 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 RRP15Q9Y3B9 282 aaKnown RBP7.42□□□□□ -1.22
BRCA1-210ENST00000471181 ZNF233A6NK53 670 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 DTNBO60941 627 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 MAP3K10Q02779 954 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 TAF1BQ53T94 588 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 C6orf118Q5T5N4 469 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 C16orf62Q7Z3J2 963 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 FGD2Q7Z6J4 655 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 LUZP2Q86TE4 346 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 TMEM87BQ96K49 555 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 TEKT3Q9BXF9 490 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 USE1Q9NZ43 259 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 VPS54Q9P1Q0 977 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 SESN1Q9Y6P5 492 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 A0A0G2JND7 137 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 XPOTO43592 962 aaKnown RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 SERPIND1P05546 499 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 ZSCAN20P17040 1043 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 C2orf54Q08AI8 447 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 NR5A1Q13285 461 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 KSR2Q6VAB6 950 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 ZNF507Q8TCN5 953 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 KLHL31Q9H511 634 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 NRBP2Q9NSY0 501 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 SEL1LQ9UBV2 794 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 TTC41PQ6P2S7 1318 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 GOLGA8RI6L899 631 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 MYO1FO00160 1098 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 COBLO75128 1261 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 KLHL18O94889 574 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 RECQLP46063 649 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 CRLF3Q8IUI8 442 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 NIM1KQ8IY84 436 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 AHI1Q8N157 1196 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms