RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 PCCAP05165 728 aaPredicted RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 NEFHP12036 1026 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 PECAM1P16284 738 aaPredicted RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 CTCFP49711 727 aaPredicted RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 CUL1Q13616 776 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 RAPGEF1Q13905 1077 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 VWA3BQ502W6 1294 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 NAALADL2Q58DX5 795 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 ADAT2Q7Z6V5 191 aaKnown RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 DHTKD1Q96HY7 919 aaPredicted RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 INPP4AQ96PE3 977 aaPredicted RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 TSC22D3Q99576 134 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 PRMT1Q99873 361 aaKnown RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 FAM129AQ9BZQ8 928 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 ZCWPW1Q9H0M4 648 aa10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 LUC7LQ9NQ29 371 aaKnown RBP10.44□□□□□ -0.74
NHLRC3-203ENST00000470258 KLRC4O43908 158 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 NQO1P15559 274 aaKnown RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 SLCO1A2P46721 670 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 MTMR3Q13615 1198 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 SLC9C1Q4G0N8 1177 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 AGBL2Q5U5Z8 902 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 C1orf131Q8NDD1 294 aaKnown RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 SDR42E1Q8WUS8 393 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 MTFR1LQ9H019 292 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ARHGEF10LQ9HCE6 1279 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 INTS9Q9NV88 658 aaKnown RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ADAMTS1Q9UHI8 967 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 TTI1O43156 1089 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 SHBGP04278 402 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 GNAT1P11488 350 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ECHS1P30084 290 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 KIF5BP33176 963 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 PCK1P35558 622 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 LONP1P36776 959 aaKnown RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 MXRA7P84157 204 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ANKRD20A2Q5SQ80 823 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ERMARDQ5T6L9 678 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ANKRD20A1Q5TYW2 823 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ANKRD20A3Q5VUR7 823 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 BRINP3Q76B58 766 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 RNF10Q8N5U6 811 aaKnown RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 KANSL2Q9H9L4 492 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 SPATA31A3Q5VYP0 1347 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 GRID2IPA4D2P6 1211 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 RHOBTB3O94955 611 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 ITGA4P13612 1032 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 PRPF4BQ13523 1007 aaKnown RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 SLC5A4Q9NY91 659 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 CORO1CQ9ULV4 474 aaPredicted RBP10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 SLC12A4Q9UP95 1085 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 TRIM33Q9UPN9 1127 aa10.43□□□□□ -0.74
NHLRC3-203ENST00000470258 CYP2D7A0A087X1C5 515 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 CFAP73A6NFT4 308 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 PRPF3O43395 683 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 LINGO3P0C6S8 592 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 PHKG2P15735 406 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 ATP2A2P16615 1042 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 POLR2FP61218 127 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 LACTBP83111 547 aaPredicted RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 LRRC14Q15048 493 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 ESR2Q92731 530 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 RNF41Q9H4P4 317 aaPredicted RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 CNOT10Q9H9A5 744 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 HOMER3Q9NSC5 361 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 USP54Q70EL1 1684 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 RTL9Q8NET4 1388 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 A0A0G2JS52 829 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 PJA2O43164 708 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 KRT16P08779 473 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 PLCG1P19174 1290 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 RPS6KA3P51812 740 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 ATP11AP98196 1134 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 CCDC38Q502W7 563 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 FIGNQ5HY92 759 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 MEI1Q5TIA1 1274 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 SFMBT2Q5VUG0 894 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 PDXDC1Q6P996 788 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 TMC3Q7Z5M5 1100 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 CCDC84Q86UT8 332 aaPredicted RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 ENAHQ8N8S7 591 aaPredicted RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 SLC17A8Q8NDX2 589 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 TRIM51Q9BSJ1 452 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 MLXIPLQ9NP71 852 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 PAPOLBQ9NRJ5 636 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 IQSEC3Q9UPP2 1182 aaPredicted RBP10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 SIK3Q9Y2K2 1263 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 LMO7Q8WWI1 1683 aa10.42□□□□□ -0.74
NHLRC3-203ENST00000470258 CCDC194A0A1B0GVG4 234 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 F8VZ95 297 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 PAEPP09466 180 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 ATP4AP20648 1035 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 CCND1P24385 295 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 ABL2P42684 1182 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms