RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 KIAA1328Q86T90 577 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 MB21D1Q8N884 522 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 RABGGTAQ92696 567 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 PIGSQ96S52 555 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 NAPGQ99747 312 aaPredicted RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 DESI2Q9BSY9 194 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TSGA10Q9BZW7 698 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TRIM9Q9C026 710 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 NT5C3AQ9H0P0 336 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 GBP3Q9H0R5 595 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 EHD4Q9H223 541 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TMEM60Q9H2L4 133 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 DHX36Q9H2U1 1008 aaKnown RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 USP40Q9NVE5 1235 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 BIN2Q9UBW5 565 aaPredicted RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 FKBPLQ9UIM3 349 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 ABCB11O95342 1321 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 KLRG2A4D1S0 409 aaPredicted RBP8.9□□□□□ -0.98
SMC4-212ENST00000470240 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 KRT86O43790 486 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 H2AFXP16104 143 aaPredicted RBP8.9□□□□□ -0.98
SMC4-212ENST00000470240 MCM3P25205 808 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 TXKP42681 527 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 TNNI2P48788 182 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 CKAP4Q07065 602 aaKnown RBP8.9□□□□□ -0.98
SMC4-212ENST00000470240 ZNF543Q08ER8 600 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 GRIK5Q16478 980 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 TXNRD1Q16881 649 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 WHAMMP3Q1A5X7 153 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 ZNF569Q5MCW4 686 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 UTP14CQ5TAP6 766 aaKnown RBP8.9□□□□□ -0.98
SMC4-212ENST00000470240 IQCEQ6IPM2 695 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 HHIPL2Q6UWX4 724 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 UNC13DQ70J99 1090 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 KRT27Q7Z3Y8 459 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 CCDC170Q8IYT3 715 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 ERMNQ8TAM6 284 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 SNX29Q8TEQ0 813 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 MED15Q96RN5 788 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 PLIN2Q99541 437 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 ACBD3Q9H3P7 528 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 HAUS4Q9H6D7 363 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 ARFGAP3Q9NP61 516 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 RIC8AQ9NPQ8 531 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 POLLQ9UGP5 575 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 MAPK8IP1Q9UQF2 711 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 LTBP1Q14766 1721 aa8.9□□□□□ -0.98
SMC4-212ENST00000470240 PP2D1A8MPX8 630 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 F8W031 263 aaPredicted RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 KLRC4O43908 158 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 USO1O60763 962 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 AKR1B1P15121 316 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 CDC25AP30304 524 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 FXR1P51114 621 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMC4-212ENST00000470240 CHMP4BP1P59074 171 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 FKBP1AP62942 108 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 ZBED6P86452 979 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 ATP2B2Q01814 1243 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 LRRC63Q05C16 580 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 GABPAQ06546 454 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 TBC1D8BQ0IIM8 1120 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 NAA30Q147X3 362 aaPredicted RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 BRD3Q15059 726 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 SPA17Q15506 151 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 PTPN21Q16825 1174 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 NAALADL2Q58DX5 795 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 C4orf48Q5BLP8 95 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 HAUS3Q68CZ6 603 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 PPP4R3AQ6IN85 833 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 CCDC70Q6NSX1 233 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 TTI2Q6NXR4 508 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 RAD9BQ6WBX8 426 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 SRGAP1Q7Z6B7 1085 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 CCDC84Q86UT8 332 aaPredicted RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 AMIGO3Q86WK7 504 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 SLFN12Q8IYM2 578 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 LRRC47Q8N1G4 583 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 DCAF4Q8WV16 495 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 LARP4BQ92615 738 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 MASTLQ96GX5 879 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 WDR24Q96S15 920 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 TUBGCP2Q9BSJ2 902 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 NOC4LQ9BVI4 516 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 UBA5Q9GZZ9 404 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 LUC7LQ9NQ29 371 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 LRRC4BQ9NT99 713 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 DDX25Q9UHL0 483 aaKnown RBP8.89□□□□□ -0.99
SMC4-212ENST00000470240 CDC23Q9UJX2 597 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 CAPN11Q9UMQ6 739 aa8.89□□□□□ -0.99
SMC4-212ENST00000470240 MYH4Q9Y623 1939 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
SMC4-212ENST00000470240 IGKV6D-41A0A0C4DH26 115 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 A0A1W2PQJ5 194 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 CTAGE15A4D2H0 777 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 TRIM49BA6NDI0 452 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 B4DLN1 442 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 ZBTB5O15062 677 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 EIF3JO75822 258 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms