RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 SIX5Q8N196 739 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 ATP8B4Q8TF62 1192 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 APBB2Q92870 758 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 S1PR5Q9H228 398 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 LIMD1Q9UGP4 676 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 CDH22Q9UJ99 828 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 ANGPTL2Q9UKU9 493 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 MBD4O95243 580 aa12.57□□□□□ -0.4
TRAIP-202ENST00000469027 POLA2Q14181 598 aa12.57□□□□□ -0.4
TRAIP-202ENST00000469027 VARS2Q5ST30 1063 aaKnown RBP12.57□□□□□ -0.4
TRAIP-202ENST00000469027 CRIPAKQ8N1N5 446 aa12.57□□□□□ -0.4
TRAIP-202ENST00000469027 TDRD5Q8NAT2 981 aaKnown RBP12.57□□□□□ -0.4
TRAIP-202ENST00000469027 SECISBP2LQ93073 1101 aaKnown RBP12.57□□□□□ -0.4
TRAIP-202ENST00000469027 CDCA3Q99618 268 aaPredicted RBP12.57□□□□□ -0.4
TRAIP-202ENST00000469027 POMKQ9H5K3 350 aa12.57□□□□□ -0.4
TRAIP-202ENST00000469027 ERVK-5Q9HDB9 667 aa12.57□□□□□ -0.4
TRAIP-202ENST00000469027 MRPL42Q9Y6G3 142 aaKnown RBP12.57□□□□□ -0.4
TRAIP-202ENST00000469027 SP9P0CG40 484 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 TRIM27P14373 513 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
TRAIP-202ENST00000469027 DUSP6Q16828 381 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 LY6KQ17RY6 165 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 PAN2Q504Q3 1202 aaKnown RBP12.56□□□□□ -0.4
TRAIP-202ENST00000469027 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 CES5AQ6NT32 575 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 SLC30A10Q6XR72 485 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 SERINC5Q86VE9 423 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 SUMF1Q8NBK3 374 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 OSBPL7Q9BZF2 842 aa12.56□□□□□ -0.4
TRAIP-202ENST00000469027 RC3H2Q9HBD1 1191 aaKnown RBP12.56□□□□□ -0.4
TRAIP-202ENST00000469027 GREB1LQ9C091 1923 aaPredicted RBP12.56□□□□□ -0.4
TRAIP-202ENST00000469027 B4DLN1 442 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 NFIBO00712 420 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 RASA1P20936 1047 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 SLC1A4P43007 532 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 MRPL12P52815 198 aaKnown RBP12.55□□□□□ -0.4
TRAIP-202ENST00000469027 ARHGAP1Q07960 439 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 SYCE2Q6PIF2 218 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 SEPT14Q6ZU15 432 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 GMCL1P1Q8NEA9 526 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 ATP6V0A1Q93050 837 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 NECTIN4Q96NY8 510 aa12.55□□□□□ -0.4
TRAIP-202ENST00000469027 KIAA1671Q9BY89 1806 aa12.54□□□□□ -0.4
TRAIP-202ENST00000469027 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-202ENST00000469027 TTLL1O95922 423 aa12.54□□□□□ -0.4
TRAIP-202ENST00000469027 F2P00734 622 aa12.54□□□□□ -0.4
TRAIP-202ENST00000469027 HOXB8P17481 243 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-202ENST00000469027 HIC1Q14526 733 aa12.54□□□□□ -0.4
TRAIP-202ENST00000469027 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
TRAIP-202ENST00000469027 ZNF689Q96CS4 500 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-202ENST00000469027 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
TRAIP-202ENST00000469027 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-202ENST00000469027 FANCMQ8IYD8 2048 aa12.54□□□□□ -0.4
TRAIP-202ENST00000469027 MYH7BA7E2Y1 1941 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 MCCP23508 829 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 SPOUT1Q5T280 376 aaKnown RBP12.53□□□□□ -0.4
TRAIP-202ENST00000469027 CTR9Q6PD62 1173 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 RNF207Q6ZRF8 634 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 KCTD1Q719H9 257 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 PRR12Q9ULL5 1215 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 PLXNA4Q9HCM2 1894 aa12.53□□□□□ -0.4
TRAIP-202ENST00000469027 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.4
TRAIP-202ENST00000469027 HAS3O00219 553 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 SURF6O75683 361 aaKnown RBP12.52□□□□□ -0.41
TRAIP-202ENST00000469027 DGKIO75912 1065 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 ICAM1P05362 532 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 TBC1D8BQ0IIM8 1120 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 PLPP4Q5VZY2 271 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
TRAIP-202ENST00000469027 ZDHHC14Q8IZN3 488 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 MKL1Q969V6 931 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-202ENST00000469027 DNAJC2Q99543 621 aaKnown RBP12.52□□□□□ -0.41
TRAIP-202ENST00000469027 MTMR4Q9NYA4 1195 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 DBR1Q9UK59 544 aaKnown RBP12.52□□□□□ -0.41
TRAIP-202ENST00000469027 MTMR7Q9Y216 660 aa12.52□□□□□ -0.41
TRAIP-202ENST00000469027 GCN1Q92616 2671 aaKnown RBP12.51□□□□□ -0.41
TRAIP-202ENST00000469027 TCRBV5S4A2TA0A5A2 114 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 GOLIM4O00461 696 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 CAND2O75155 1236 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 BCAR3O75815 825 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 DCNP07585 359 aaKnown RBP12.51□□□□□ -0.41
TRAIP-202ENST00000469027 WEE2P0C1S8 567 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 GHRP10912 638 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 EDNRBP24530 442 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 MTHFRP42898 656 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 TMEM184AQ6ZMB5 413 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 C1orf210Q8IVY1 113 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
TRAIP-202ENST00000469027 DNERQ8NFT8 737 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 CLUAP1Q96AJ1 413 aa12.51□□□□□ -0.41
TRAIP-202ENST00000469027 ARPP21Q9UBL0 812 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms