RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 LONRF3Q496Y0 759 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 CYP27C1Q4G0S4 372 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 HSP90AB4PQ58FF6 505 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 IFIT1BQ5T764 474 aaKnown RBP4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 TMED8Q6PL24 325 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 CEP68Q76N32 757 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 APBB1IPQ7Z5R6 666 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 FAM20CQ8IXL6 584 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 CMIPQ8IY22 773 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 LENG1Q96BZ8 264 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 IL17RAQ96F46 866 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 TMEM169Q96HH4 297 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 MYRFLQ96LU7 910 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 PTCHD1Q96NR3 888 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 MMP19Q99542 508 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 TOPORSQ9NS56 1045 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 ZSWIM5Q9P217 1185 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 INTUQ9ULD6 942 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 CBLCQ9ULV8 474 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 DAAM1Q9Y4D1 1078 aa4.72□□□□□ -1.65
HMGB1P25-201ENST00000468402 K7ESF4 209 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 ERC2O15083 957 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 DHX15O43143 795 aaKnown RBP4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 AP1G1O43747 822 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 SH3BP5O60239 455 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 NPHS1O60500 1241 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 FOSP01100 380 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 RBP3P10745 1247 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 COL6A2P12110 1019 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 TRIM27P14373 513 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 RPL10P27635 214 aaKnown RBP4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 MECP2P51608 486 aaKnown RBP4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 GTF2A2P52657 109 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 KIF11P52732 1056 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 SPIRE1Q08AE8 756 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 ADGRE1Q14246 886 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 LRRC32Q14392 662 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 DHX8Q14562 1220 aaKnown RBP4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 GRM3Q14832 879 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 UVSSAQ2YD98 709 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 INAVAQ3KP66 663 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 OGFOD3Q6PK18 319 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 SEZ6L2Q6UXD5 910 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 ARHGAP36Q6ZRI8 547 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 RASSF3Q86WH2 238 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 FBXL6Q8N531 539 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 USHBP1Q8N6Y0 703 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 KIAA1958Q8N8K9 716 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 PJA1Q8NG27 643 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 TGFBRAP1Q8WUH2 860 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 TRMT2BQ96GJ1 504 aaKnown RBP4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 HEXIM2Q96MH2 286 aaKnown RBP4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 SARGQ9BW04 601 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 TCF7L1Q9HCS4 588 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 MAN1C1Q9NR34 630 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 KCNG1Q9UIX4 513 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 CAPN6Q9Y6Q1 641 aa4.71□□□□□ -1.66
HMGB1P25-201ENST00000468402 WTIPA6NIX2 430 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 H3BS24 57 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 TGM5O43548 720 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 CTNND1O60716 968 aaKnown RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 H2AFYO75367 372 aaKnown RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZNF205O95201 554 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 PAX3P23760 479 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 JAM2P57087 298 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 SAFBQ15424 915 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 TERF2Q15554 542 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 TESK1Q15569 626 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 RTP2Q5QGT7 225 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 TMEM240Q5SV17 173 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 MBLAC2Q68D91 279 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 EPM2AIP1Q7L775 607 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 TSPYL5Q86VY4 417 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 PTRH1Q86Y79 214 aaKnown RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 CMTR2Q8IYT2 770 aaKnown RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 LINC00116Q8NCU8 138 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 UBE2FQ969M7 185 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 TTC17Q96AE7 1141 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 ELF4Q99607 663 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 DUSP15Q9H1R2 295 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 MS4A5Q9H3V2 200 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 PPCSQ9HAB8 311 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 NMRK2Q9NPI5 230 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 ANLNQ9NQW6 1124 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 PUF60Q9UHX1 559 aaKnown RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 DUSP13Q9UII6 198 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 COA3Q9Y2R0 106 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 SPO11Q9Y5K1 396 aa4.7□□□□□ -1.66
HMGB1P25-201ENST00000468402 CCDC189A1A4V9 331 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 C7orf72A4D263 438 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 WASH4PA8MWX3 477 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 HMGB1P1B2RPK0 211 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 IGF2BP3O00425 579 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 IFRD1O00458 451 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 SCDO00767 359 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 WNT9AO14904 365 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms