RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TAF7LQ5H9L4 462 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 C7orf61Q8IZ16 206 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 TMEM102Q8N9M5 508 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-207ENST00000467273 GUCD1Q96NT3 240 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 SLC38A3Q99624 504 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 OSMRQ99650 979 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 TMEM39BQ9GZU3 492 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 TDRD3Q9H7E2 651 aaKnown RBP6.88□□□□□ -1.31
PTCD3-207ENST00000467273 RC3H2Q9HBD1 1191 aaKnown RBP6.88□□□□□ -1.31
PTCD3-207ENST00000467273 FOXD3Q9UJU5 478 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-207ENST00000467273 SLC45A1Q9Y2W3 748 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 PCDHAC2Q9Y5I4 1007 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 ACTL7BQ9Y614 415 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 A0A1B0GUL6 1792 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 AOX1Q06278 1338 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 F8W031 263 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-207ENST00000467273 CXCL11O14625 94 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 FLT3LGP49771 235 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 FGD1P98174 961 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 CHRNDQ07001 517 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 NEXNQ0ZGT2 675 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 KRT24Q2M2I5 525 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 FASTKD5Q7L8L6 764 aaKnown RBP6.87□□□□□ -1.31
PTCD3-207ENST00000467273 SPRED2Q7Z698 418 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 STK11IPQ8N1F8 1099 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-207ENST00000467273 MAFAQ8NHW3 353 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-207ENST00000467273 ZKSCAN3Q9BRR0 538 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 MRIQ9BWK5 157 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 BACH2Q9BYV9 841 aa6.87□□□□□ -1.31
PTCD3-207ENST00000467273 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTCD3-207ENST00000467273 ZMYND8Q9ULU4 1186 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-207ENST00000467273 CDH23Q9H251 3354 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 TCP10L2B9ZVM9 353 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 TNFRSF21O75509 655 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 HMGCRP04035 888 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 NEFLP07196 543 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 CSF1RP07333 972 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 TCF3P15923 654 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 DAB2P98082 770 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 MOGSQ13724 837 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 MFSD14BQ5SR56 506 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 NOL9Q5SY16 702 aaKnown RBP6.86□□□□□ -1.31
PTCD3-207ENST00000467273 ALG1LQ6GMV1 187 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 XKR5Q6UX68 686 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 ZKSCAN4Q969J2 545 aaPredicted RBP6.86□□□□□ -1.31
PTCD3-207ENST00000467273 NXPE3Q969Y0 559 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 COA7Q96BR5 231 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 FAM122AQ96E09 287 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 ZNF341Q9BYN7 854 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 BCL11AQ9H165 835 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 SEMA6CQ9H3T2 930 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 C11orf49Q9H6J7 331 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 PHAXQ9H814 394 aaKnown RBP6.86□□□□□ -1.31
PTCD3-207ENST00000467273 TMOD2Q9NZR1 351 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 ZNF112Q9UJU3 913 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 OGDHLQ9ULD0 1010 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 GABRQQ9UN88 632 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 TTF2Q9UNY4 1162 aaKnown RBP6.86□□□□□ -1.31
PTCD3-207ENST00000467273 DDX60LQ5H9U9 1706 aaKnown RBP6.86□□□□□ -1.31
PTCD3-207ENST00000467273 DNAH12Q6ZR08 3092 aa6.86□□□□□ -1.31
PTCD3-207ENST00000467273 TMEM265A0A087WTH1 108 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 ANKRD18BA2A2Z9 1011 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 TNPO2O14787 897 aaKnown RBP6.85□□□□□ -1.31
PTCD3-207ENST00000467273 CPNE3O75131 537 aaKnown RBP6.85□□□□□ -1.31
PTCD3-207ENST00000467273 IGKV5-2P06315 115 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 CRKP46108 304 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 BNIP3Q12983 259 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 PSMD2Q13200 908 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 KSR2Q6VAB6 950 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 DYMQ7RTS9 669 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-207ENST00000467273 WFDC3Q8IUB2 231 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 TDRD7Q8NHU6 1098 aaKnown RBP6.85□□□□□ -1.31
PTCD3-207ENST00000467273 DIS3LQ8TF46 1054 aaKnown RBP6.85□□□□□ -1.31
PTCD3-207ENST00000467273 TBC1D22AQ8WUA7 517 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 DNAJC25Q9H1X3 360 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 SOX17Q9H6I2 414 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-207ENST00000467273 MRS2Q9HD23 443 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 BDP1A6H8Y1 2624 aa6.85□□□□□ -1.31
PTCD3-207ENST00000467273 MAST3O60307 1309 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 SYNGAP1Q96PV0 1343 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 ZNF865P0CJ78 1059 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-207ENST00000467273 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-207ENST00000467273 COL6A1P12109 1028 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 SYN1P17600 705 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 CCDC30Q5VVM6 783 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 UBE3BQ7Z3V4 1068 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 JARID2Q92833 1246 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-207ENST00000467273 TEKT1Q969V4 418 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 ZDHHC15Q96MV8 337 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 CDX2Q99626 313 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-207ENST00000467273 LBHD1Q9BQE6 289 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-207ENST00000467273 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 MAP3K2Q9Y2U5 619 aa6.84□□□□□ -1.31
PTCD3-207ENST00000467273 LAS1LQ9Y4W2 734 aaKnown RBP6.84□□□□□ -1.31
PTCD3-207ENST00000467273 A0A0G2JLL6 359 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms