RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 PLIN2Q99541 437 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 TEKT3Q9BXF9 490 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 DOCK5Q9H7D0 1870 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 ADD3Q9UEY8 706 aaKnown RBP14.62□□□□□ -0.07
COL4A1-202ENST00000467182 SPATA31C2B4DYI2 1134 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 MAFGO15525 162 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 STRNO43815 780 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 GAS7O60861 476 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 AOC2O75106 756 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 EIF3JO75822 258 aaKnown RBP14.61□□□□□ -0.07
COL4A1-202ENST00000467182 KCNA2P16389 499 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 ADORA2AP29274 412 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 SARSP49591 514 aaKnown RBP14.61□□□□□ -0.07
COL4A1-202ENST00000467182 TYRO3Q06418 890 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 CRHR2Q13324 411 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 GRB14Q14449 540 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 STXBP2Q15833 593 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 NT5DC1Q5TFE4 455 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 WDR78Q5VTH9 848 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 CEP57L1Q8IYX8 460 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 CALML4Q96GE6 196 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 CUEDC2Q9H467 287 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 THSD7BQ9C0I4 1608 aa14.61□□□□□ -0.07
COL4A1-202ENST00000467182 MCM3APO60318 1980 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 A0A087WWV3 80 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.6□□□□□ -0.07
COL4A1-202ENST00000467182 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 RPA1P27694 616 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 CASP1P29466 404 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 MAPK4P31152 587 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 CCT6AP40227 531 aaKnown RBP14.6□□□□□ -0.07
COL4A1-202ENST00000467182 DPYDQ12882 1025 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 NOGQ13253 232 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
COL4A1-202ENST00000467182 PLEKHH3Q7Z736 793 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 CATSPER3Q86XQ3 398 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 STAMQ92783 540 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 CAPNS2Q96L46 248 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 HSD17B14Q9BPX1 270 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 EIF2AK1Q9BQI3 630 aaKnown RBP14.6□□□□□ -0.07
COL4A1-202ENST00000467182 POLR3CQ9BUI4 534 aaPredicted RBP14.6□□□□□ -0.07
COL4A1-202ENST00000467182 TSPY26PQ9H489 355 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 BCAS3Q9H6U6 928 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 ZFYVE28Q9HCC9 887 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 TBC1D22BQ9NU19 505 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 PKD2L1Q9P0L9 805 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 PCDHA5Q9Y5H7 936 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 MGAMO43451 1857 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 KDM3AQ9Y4C1 1321 aa14.6□□□□□ -0.07
COL4A1-202ENST00000467182 ZSWIM8A7E2V4 1837 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 WDR81Q562E7 1941 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 POTEB3A0JP26 581 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 CA12O43570 354 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
COL4A1-202ENST00000467182 CCDC192P0DO97 292 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 AFMP43652 599 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 SP2Q02086 613 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 GRM1Q13255 1194 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 EPHA7Q15375 998 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 ZRSR1Q15695 479 aaKnown RBP14.59□□□□□ -0.07
COL4A1-202ENST00000467182 MORN1Q5T089 497 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 HAUS3Q68CZ6 603 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 POTEBQ6S5H4 581 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 PAXIP1Q6ZW49 1069 aaPredicted RBP14.59□□□□□ -0.07
COL4A1-202ENST00000467182 RAD54LQ92698 747 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 SENP7Q9BQF6 1050 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 RBSNQ9H1K0 784 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 MAGEF1Q9HAY2 307 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 STK17AQ9UEE5 414 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 STK24Q9Y6E0 443 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 NFASCO94856 1347 aa14.59□□□□□ -0.07
COL4A1-202ENST00000467182 SLC15A5A6NIM6 579 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 DDX39AO00148 427 aaKnown RBP14.58□□□□□ -0.08
COL4A1-202ENST00000467182 SLITRK3O94933 977 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 CCNE2O96020 404 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 BMP6P22004 513 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 CTGFP29279 349 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 PDE4DQ08499 809 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 CUL4BQ13620 913 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 GNPTABQ3T906 1256 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 SASS6Q6UVJ0 657 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 ZNF467Q7Z7K2 595 aaPredicted RBP14.58□□□□□ -0.08
COL4A1-202ENST00000467182 RASSF8Q8NHQ8 419 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 ERMNQ8TAM6 284 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 USP6NLQ92738 828 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 DYDC2Q96IM9 177 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 CDHR1Q96JP9 859 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 NT5C3AQ9H0P0 336 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 RGL1Q9NZL6 768 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 WRAP73Q9P2S5 460 aaPredicted RBP14.58□□□□□ -0.08
COL4A1-202ENST00000467182 MAN1B1Q9UKM7 699 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 KIAA1024Q9UPX6 916 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 TELO2Q9Y4R8 837 aa14.58□□□□□ -0.08
COL4A1-202ENST00000467182 POTEFA5A3E0 1075 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 E9PMD0 336 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 CHMP2AO43633 222 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 KLRC4O43908 158 aa14.57□□□□□ -0.08
COL4A1-202ENST00000467182 PSMC6P62333 389 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms