RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 FLOT1O75955 427 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 DSG3P32926 999 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 HTRA3P83110 453 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 NOGQ13253 232 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 FAM107BQ9H098 131 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 DONSONQ9NYP3 566 aa17.15■□□□□ 0.34
SNED1-208ENST00000466618 V9GY48 417 aaPredicted RBP17.15■□□□□ 0.34
SNED1-208ENST00000466618 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
SNED1-208ENST00000466618 HNRNPH1P31943 449 aaKnown RBP17.14■□□□□ 0.33
SNED1-208ENST00000466618 TM4SF4P48230 202 aa17.14■□□□□ 0.33
SNED1-208ENST00000466618 LIG3P49916 1009 aa17.14■□□□□ 0.33
SNED1-208ENST00000466618 PKN1Q16512 942 aa17.14■□□□□ 0.33
SNED1-208ENST00000466618 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.33
SNED1-208ENST00000466618 AKR1B15C9JRZ8 316 aaPredicted RBP17.13■□□□□ 0.33
SNED1-208ENST00000466618 IGF2BP3O00425 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNED1-208ENST00000466618 TUBBP07437 444 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 SSRP1Q08945 709 aaKnown RBP17.13■□□□□ 0.33
SNED1-208ENST00000466618 IKQ13123 557 aaPredicted RBP17.13■□□□□ 0.33
SNED1-208ENST00000466618 PABPC4Q13310 644 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNED1-208ENST00000466618 NR1I3Q14994 352 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 WHAMMP3Q1A5X7 153 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 LBX2Q6XYB7 198 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 IGSF22Q8N9C0 903 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 ANKRD20A12PQ8NF67 263 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 PIGSQ96S52 555 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 SLC26A6Q9BXS9 759 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
SNED1-208ENST00000466618 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 NFE2L3Q9Y4A8 694 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
SNED1-208ENST00000466618 PDHXO00330 501 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 FOXN1O15353 648 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 MAP2K2P36507 400 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 LONRF3Q496Y0 759 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 EP400NLQ6ZTU2 488 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
SNED1-208ENST00000466618 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 HPCAL4Q9UM19 191 aa17.13■□□□□ 0.33
SNED1-208ENST00000466618 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 VWA5AO00534 786 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 ZBTB5O15062 677 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 PPP6R2O75170 966 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 HSPA6P17066 643 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 PTPAQ15257 358 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 SKIDA1Q1XH10 827 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 FBXW10Q5XX13 1052 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 ATG4CQ96DT6 458 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
SNED1-208ENST00000466618 MED15Q96RN5 788 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
SNED1-208ENST00000466618 AOC2O75106 756 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 DEXIO95424 95 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 ABL1P00519 1130 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 FDX1P10109 184 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 SREBF2Q12772 1141 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 BANK1Q8NDB2 785 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 RIN2Q8WYP3 895 aaPredicted RBP17.12■□□□□ 0.33
SNED1-208ENST00000466618 NAA15Q9BXJ9 866 aaKnown RBP17.12■□□□□ 0.33
SNED1-208ENST00000466618 FAM169AQ9Y6X4 670 aa17.12■□□□□ 0.33
SNED1-208ENST00000466618 RLFQ13129 1914 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 A0A1B0GTH6 734 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 OSBPP22059 807 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 CCT5P48643 541 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 VEGFBP49765 207 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 SNAP25P60880 206 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
SNED1-208ENST00000466618 AMPD2Q01433 879 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
SNED1-208ENST00000466618 PFKFB3Q16875 520 aaPredicted RBP17.11■□□□□ 0.33
SNED1-208ENST00000466618 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
SNED1-208ENST00000466618 ENOX1Q8TC92 643 aaKnown RBP17.11■□□□□ 0.33
SNED1-208ENST00000466618 NAPGQ99747 312 aaPredicted RBP17.11■□□□□ 0.33
SNED1-208ENST00000466618 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 ZNF536O15090 1300 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 MNAT1P51948 309 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 HERVK_113P62684 666 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 GRM1Q13255 1194 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
SNED1-208ENST00000466618 TEX33O43247 280 aa17.1■□□□□ 0.33
SNED1-208ENST00000466618 CYP2C8P10632 490 aa17.1■□□□□ 0.33
SNED1-208ENST00000466618 RBL2Q08999 1139 aa17.1■□□□□ 0.33
SNED1-208ENST00000466618 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
SNED1-208ENST00000466618 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
SNED1-208ENST00000466618 AIFM3Q96NN9 605 aa17.1■□□□□ 0.33
SNED1-208ENST00000466618 SAMSN1Q9NSI8 373 aaKnown RBP17.1■□□□□ 0.33
SNED1-208ENST00000466618 SUFUQ9UMX1 484 aa17.1■□□□□ 0.33
SNED1-208ENST00000466618 ATP2A1O14983 1001 aa17.09■□□□□ 0.33
SNED1-208ENST00000466618 SCG2P13521 617 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms