RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 STX10O60499 249 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 PSMD10O75832 226 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 HMGCS2P54868 508 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 SLC12A3P55017 1021 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 DLK2Q6UY11 383 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 OTOP1Q7RTM1 612 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 SYT17Q9BSW7 474 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 SEMA6BQ9H3T3 888 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 BICDL2A1A5D9 508 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 VWA5AO00534 786 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 CYP11B2P19099 503 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 COASYQ13057 564 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 PRKG1Q13976 671 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 LRCH2Q5VUJ6 765 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 GPBP1Q86WP2 473 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 MCF2L2Q86YR7 1114 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 CSGALNACT2Q8N6G5 542 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 GLIS3Q8NEA6 775 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 ATG4CQ96DT6 458 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 RPTORQ8N122 1335 aa20.34■□□□□ 0.85
COL9A3-205ENST00000466192 NPHP3-ACAD11A0A0J9YXS1 232 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 ARP10275 920 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 YBX3P16989 372 aaKnown RBP eCLIP20.33■□□□□ 0.85
COL9A3-205ENST00000466192 CYP4A11Q02928 519 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 PSMD2Q13200 908 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 SUPT20HL1Q3ZLR7 823 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 CENPPQ6IPU0 288 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 C12orf42Q96LP6 360 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 EIF2AK1Q9BQI3 630 aaKnown RBP20.33■□□□□ 0.85
COL9A3-205ENST00000466192 PITPNM2Q9BZ72 1349 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 BMP2KQ9NSY1 1161 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-205ENST00000466192 PANK4Q9NVE7 773 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 STK24Q9Y6E0 443 aa20.33■□□□□ 0.85
COL9A3-205ENST00000466192 PTPRFP10586 1907 aa20.33■□□□□ 0.84
COL9A3-205ENST00000466192 ZBED4O75132 1171 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 EEF1GP26641 437 aaKnown RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 ARSHQ5FYA8 562 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 GUF1Q8N442 669 aaKnown RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 NOC3LQ8WTT2 800 aaKnown RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 MAP7D2Q96T17 732 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 POLR3CQ9BUI4 534 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 OTOFQ9HC10 1997 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 USP2O75604 605 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 GYPCP04921 128 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 CASP14P31944 242 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 PPP2R5CQ13362 524 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 NOL9Q5SY16 702 aaKnown RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 IL31RAQ8NI17 732 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 ADARB2Q9NS39 739 aaKnown RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 RGL1Q9NZL6 768 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
COL9A3-205ENST00000466192 CTDP1Q9Y5B0 961 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-205ENST00000466192 ITIH6Q6UXX5 1313 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 C19orf81C9J6K1 198 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 PES1O00541 588 aaKnown RBP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 CCP110O43303 1012 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 RBM10P98175 930 aaKnown RBP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 UBXN1Q04323 297 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 PABPC4Q13310 644 aaKnown RBP eCLIP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 LRRC41Q15345 812 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 SYTL5Q8TDW5 730 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 PANX2Q96RD6 677 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 MXRA8Q9BRK3 442 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 ZNF577Q9BSK1 485 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 PAPPA2Q9BXP8 1791 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 FDX1P10109 184 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 ITGB5P18084 799 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 SETQ01105 290 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 RAD51AP2Q09MP3 1159 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 SYT2Q8N9I0 419 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 KIF18AQ8NI77 898 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 TRERF1Q96PN7 1200 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 HSD17B14Q9BPX1 270 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-205ENST00000466192 RABGAP1Q9Y3P9 1069 aa20.31■□□□□ 0.84
COL9A3-205ENST00000466192 KIF2AO00139 706 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-205ENST00000466192 CHMP2AO43633 222 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 GAS7O60861 476 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 FXR1P51114 621 aaKnown RBP eCLIP20.3■□□□□ 0.84
COL9A3-205ENST00000466192 RPS6P62753 249 aaKnown RBP20.3■□□□□ 0.84
COL9A3-205ENST00000466192 TOGARAM2Q6ZUX3 1019 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 REPS2Q8NFH8 660 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 FGFBP2Q9BYJ0 223 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 AFG3L2Q9Y4W6 797 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 RIPK3Q9Y572 518 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 PCDHA2Q9Y5H9 948 aa20.3■□□□□ 0.84
COL9A3-205ENST00000466192 MFAP3LO75121 409 aa20.29■□□□□ 0.84
COL9A3-205ENST00000466192 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
COL9A3-205ENST00000466192 FAM26FQ5R3K3 315 aa20.29■□□□□ 0.84
COL9A3-205ENST00000466192 CCDC65Q8IXS2 484 aa20.29■□□□□ 0.84
COL9A3-205ENST00000466192 MAP3K20Q9NYL2 800 aaKnown RBP20.29■□□□□ 0.84
COL9A3-205ENST00000466192 PPP2R2CQ9Y2T4 447 aa20.29■□□□□ 0.84
COL9A3-205ENST00000466192 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.29■□□□□ 0.84
COL9A3-205ENST00000466192 FRMD3A2A2Y4 597 aa20.29■□□□□ 0.84
COL9A3-205ENST00000466192 SLITRK3O94933 977 aa20.29■□□□□ 0.84
COL9A3-205ENST00000466192 TPM1P09493 284 aa20.29■□□□□ 0.84
COL9A3-205ENST00000466192 CTTNQ14247 550 aaKnown RBP20.29■□□□□ 0.84
COL9A3-205ENST00000466192 SYT10Q6XYQ8 523 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms